RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 LATO43561 262 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TSPAN6O43657 245 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GNAO1P09471 354 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 EOGTQ5NDL2 527 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM168Q9H0V1 697 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM248Q9NWD8 314 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HRASLS2Q9NWW9 162 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ABCD2Q9UBJ2 740 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ABCG2Q9UNQ0 655 aa13.09□□□□□ -0.31
CHRFAM7A-201ENST00000299847 A0A0U1RQF3 1178 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HTR3EA5X5Y0 456 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZXDBP98169 803 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PAFAH1B3Q15102 231 aaKnown RBP13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RUNDC3AQ59EK9 446 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SH3D19Q5HYK7 790 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GPRIN1Q7Z2K8 1008 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CMKLR1Q99788 373 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF701Q9NV72 531 aaPredicted RBP13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FETUBQ9UGM5 382 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CFL2Q9Y281 166 aa13.08□□□□□ -0.31
CHRFAM7A-201ENST00000299847 A0A1B0GV50 99 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SOCS2O14508 198 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HAPLN1P10915 354 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GLDCP23378 1020 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DNM1P34Q6PK57 102 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TSACCQ96A04 125 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RDH12Q96NR8 316 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MCHR1Q99705 422 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GABRQQ9UN88 632 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 WDR45Q9Y484 360 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ASB3Q9Y575 518 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 I3L521 148 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PRLP01236 227 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PER3P56645 1201 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 EXOC3L2Q2M3D2 409 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM76BQ5HYJ3 339 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZFP41Q8N8Y5 198 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NLGN4YQ8NFZ3 816 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR56A1Q8NGH5 318 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MYEF2Q9P2K5 600 aaKnown RBP13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SOX30O94993 753 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SNAP29O95721 258 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KLK3P07288 261 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SFTPBP07988 381 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IL3P08700 152 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SCNN1AP37088 669 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC15A1P46059 708 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MPP2Q14168 576 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NFE2L1Q14494 772 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ATG5Q9H1Y0 275 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SPEF1Q9Y4P9 236 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 A0A1W2PP18 115 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C2orf78A6NCI8 922 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PRAMEF11O60813 436 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SERINC3Q13530 473 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CCINQ13939 588 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PTGR1Q14914 329 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 UBQLNLQ8IYU4 475 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NSMAFQ92636 917 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HCN2Q9UL51 889 aa13.08□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KIF1AQ12756 1690 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 AGR2O95994 175 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 EBLN1P0CF75 366 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GADD45AP24522 165 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RBM34P42696 430 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MAGEA8P43361 318 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GALNT2Q10471 571 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PHC2Q8IXK0 858 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ACTR3BQ9P1U1 418 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ATP6V1G1O75348 118 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OAS1P00973 400 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PRSS56P0CW18 603 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF280AP59817 542 aaPredicted RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KIAA1614Q5VZ46 1190 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF761Q86XN6 746 aaPredicted RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 P2RY13Q9BPV8 354 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC29A3Q9BZD2 475 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ENY2Q9NPA8 101 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PEX12O00623 359 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HCRTR2O43614 444 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NUAK1O60285 661 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GAS6Q14393 721 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ALG10Q5BKT4 473 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ERMP1Q7Z2K6 904 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C12orf40Q86WS4 652 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CARM1Q86X55 608 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MAPKAP1Q9BPZ7 522 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MOV10Q9HCE1 1003 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SIX4Q9UIU6 781 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms