RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 DUSP7Q16829 419 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 TMEM31Q5JXX7 168 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 ANXA8L1Q5VT79 327 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 HIST2H2AA3Q6FI13 130 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 ERICH5Q6P6B1 374 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 KLHL35Q6PF15 583 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PARM1Q6UWI2 310 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 ADCK2Q7Z695 626 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PGBD3Q8N328 593 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 HDDC3Q8N4P3 179 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 FAR1Q8WVX9 515 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 APH1BQ8WW43 257 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 RAD51AP1Q96B01 352 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PPP1R16AQ96I34 528 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 RDH12Q96NR8 316 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 DOHHQ9BU89 302 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 BHLHE41Q9C0J9 482 aaPredicted RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 TRIT1Q9H3H1 467 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 ITM2CQ9NQX7 267 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 IMP3Q9NV31 184 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 THAP10Q9P2Z0 257 aaPredicted RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 RAB23Q9ULC3 237 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 CORINQ9Y5Q5 1042 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 IGKV1-8A0A0C4DH67 115 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 A0A0J9YVX5 310 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 C4orf51C9J302 202 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 MT-ND2P03891 347 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 JUNBP17275 347 aaPredicted RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 PCGF2P35227 344 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 KRT20P35900 424 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 NUDT6P53370 316 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 OCA2Q04671 838 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 DCTN2Q13561 401 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 PDGFRLQ15198 375 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 IRF4Q15306 451 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 EXOC3L2Q2M3D2 409 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 ZNF750Q32MQ0 723 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PAGE2BQ5JRK9 111 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 ZNF765Q7L2R6 523 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 ARHGAP22Q7Z5H3 698 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 LRRTM4Q86VH4 590 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 EXOSC8Q96B26 276 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 MYADMQ96S97 322 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 INSM2Q96T92 566 aaPredicted RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 MKRN2Q9H000 416 aaKnown RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 DPEP2Q9H4A9 486 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 TIMMDC1Q9NPL8 285 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 MIEF1Q9NQG6 463 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 TAS2R9Q9NYW1 312 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 ZNF282Q9UDV7 671 aaPredicted RBP11.24□□□□□ -0.61
RHO-201ENST00000296271 GPR34Q9UPC5 381 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 CA5BQ9Y2D0 317 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 LYVE1Q9Y5Y7 322 aa11.24□□□□□ -0.61
RHO-201ENST00000296271 C17orf113A0A1B0GUU1 675 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 PI15O43692 258 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 BCAS1O75363 584 aaPredicted RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 RB1P06400 928 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ITGAMP11215 1152 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 RYKP34925 604 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 EEF1A2Q05639 463 aaKnown RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 ZNF33BQ06732 778 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 NPRL3Q12980 569 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CST6Q15828 149 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 TMEM236Q5W0B7 351 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 METRNLQ641Q3 311 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 BTLAQ7Z6A9 289 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 UBE3DQ7Z6J8 389 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 SHISA5Q8N114 240 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 PHOSPHO2Q8TCD6 241 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 DNASE1L2Q92874 299 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 RPL3LQ92901 407 aaKnown RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 MUL1Q969V5 352 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 REPS1Q96D71 796 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 GABARAPL1Q9H0R8 117 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 KLHL31Q9H511 634 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ANKRA2Q9H9E1 313 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 MYNNQ9NPC7 610 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CDH7Q9ULB5 785 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 NDRG4Q9ULP0 352 aaKnown RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 SOBPA7XYQ1 873 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 TNFRSF11BO00300 401 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 OR1F1O43749 312 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 VEGFDO43915 354 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CCNA2P20248 432 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CD72P21854 359 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 BSGP35613 385 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ARHGDIAP52565 204 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CDK6Q00534 326 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 SPIBQ01892 262 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CLCA4Q14CN2 919 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 MAD2L1BPQ15013 274 aaPredicted RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 SHHQ15465 462 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 GCNT6Q5T4J0 391 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 FAHD1Q6P587 224 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 AHSA2Q719I0 299 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 RTL10Q7L3V2 364 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 C17orf64Q86WR6 236 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 RBM45Q8IUH3 476 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms