RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 POPDC3Q9HBV1 291 aa18.29■□□□□ 0.52
CXCL3-201ENST00000296026 PPIEQ9UNP9 301 aaKnown RBP18.29■□□□□ 0.52
CXCL3-201ENST00000296026 CLDN16Q9Y5I7 305 aa18.29■□□□□ 0.52
CXCL3-201ENST00000296026 GTF3C1Q12789 2109 aa18.29■□□□□ 0.52
CXCL3-201ENST00000296026 A0A088AWK7 358 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 ANKDD1BA6NHY2 528 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 EFCAB8A8MWE9 144 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 B3GALT2O43825 422 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 CLEC3AO75596 197 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 PIAS1O75925 651 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 POU3F2P20265 443 aaPredicted RBP18.28■□□□□ 0.52
CXCL3-201ENST00000296026 ZNF10P21506 573 aaPredicted RBP18.28■□□□□ 0.52
CXCL3-201ENST00000296026 GSTM2P28161 218 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 KIR3DL1P43629 444 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 HNRNPFP52597 415 aaKnown RBP18.28■□□□□ 0.52
CXCL3-201ENST00000296026 PLA2G16P53816 162 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 CAPN12Q6ZSI9 719 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 ZBED8Q8IZ13 594 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 EID3Q8N140 333 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 SPATA6LQ8N4H0 392 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 FAM47BQ8NA70 645 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 OR2L5Q8NG80 312 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 NCLNQ969V3 563 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 SEC16BQ96JE7 1060 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 QRFPRQ96P65 431 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 MCMBPQ9BTE3 642 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 CAPS2Q9BXY5 557 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 DERL2Q9GZP9 239 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 NT5DC2Q9H857 520 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 GPRC5BQ9NZH0 403 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 PPT2Q9UMR5 302 aa18.28■□□□□ 0.52
CXCL3-201ENST00000296026 A0A1B0GTH9 108 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 USP27XA6NNY8 438 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 CCDC188H7C350 402 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 TAPBPO15533 448 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 HS6ST1O60243 411 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 TBX6O95947 436 aaPredicted RBP18.27■□□□□ 0.52
CXCL3-201ENST00000296026 PTGS2P35354 604 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 GPR143P51810 404 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 GPR85P60893 370 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 TRIM40Q6P9F5 258 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 MDGA2Q7Z553 956 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 ZNF595Q8IYB9 648 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 C16orf52Q8NHV5 167 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 FAM57AQ8TBR7 257 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 SDCCAG3Q96C92 435 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 CCDC77Q9BR77 488 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 TMEM79Q9BSE2 394 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 PITHD1Q9GZP4 211 aaPredicted RBP18.27■□□□□ 0.52
CXCL3-201ENST00000296026 REXO4Q9GZR2 422 aaKnown RBP18.27■□□□□ 0.52
CXCL3-201ENST00000296026 CAB39LQ9H9S4 337 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 ADAP2Q9NPF8 381 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 SMYD2Q9NRG4 433 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 DNAJC11Q9NVH1 559 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 WWOXQ9NZC7 414 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 MRPS33Q9Y291 106 aaKnown RBP18.27■□□□□ 0.52
CXCL3-201ENST00000296026 MTO1Q9Y2Z2 717 aaKnown RBP18.27■□□□□ 0.52
CXCL3-201ENST00000296026 PDZD2O15018 2839 aa18.27■□□□□ 0.52
CXCL3-201ENST00000296026 PKDREJQ9NTG1 2253 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CLGNO14967 610 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 PRKNO60260 465 aaPredicted RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CDC40O60508 579 aaKnown RBP eCLIP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 ZFAND5O76080 213 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 WISP3O95389 354 aaPredicted RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 TPOP07202 933 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 TFEBP19484 476 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CERS1P27544 350 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 HPDP32754 393 aaPredicted RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 RPL21P46778 160 aaKnown RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 SSR4P51571 173 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 GNG11P61952 73 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 POU4F1Q01851 419 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 ADPRMQ3LIE5 342 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CMPK2Q5EBM0 449 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 FBXO48Q5FWF7 155 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 ADNP2Q6IQ32 1131 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 C16orf47Q6ZP98 133 aaPredicted RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 VN1R5Q7Z5H4 357 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CLNKQ7Z7G1 428 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CD163Q86VB7 1156 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 TCAIMQ8N3R3 496 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 ZFP62Q8NB50 900 aaPredicted RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CA5BP1Q8WTZ4 195 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 ESAMQ96AP7 390 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 SERINC2Q96SA4 455 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CSF3RQ99062 836 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 EHD1Q9H4M9 534 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CNOT10Q9H9A5 744 aaKnown RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 TIMMDC1Q9NPL8 285 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 KCMF1Q9P0J7 381 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 ERVK-11Q9UQG0 969 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 YARS2Q9Y2Z4 477 aaKnown RBP18.26■□□□□ 0.51
CXCL3-201ENST00000296026 SNX24Q9Y343 169 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 SAR1BQ9Y6B6 198 aa18.26■□□□□ 0.51
CXCL3-201ENST00000296026 CYR61O00622 381 aa18.25■□□□□ 0.51
CXCL3-201ENST00000296026 PHGDHO43175 533 aaKnown RBP18.25■□□□□ 0.51
CXCL3-201ENST00000296026 PRAMEF4O60810 478 aa18.25■□□□□ 0.51
CXCL3-201ENST00000296026 CCDC166P0CW27 439 aa18.25■□□□□ 0.51
CXCL3-201ENST00000296026 SSTR2P30874 369 aa18.25■□□□□ 0.51
CXCL3-201ENST00000296026 GGT5P36269 586 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms