RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 BCHEP06276 602 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 NR2F6P10588 404 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 JUNDP17535 347 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 GPR33Q49SQ1 333 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ZMAT1Q5H9K5 638 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 IQCF1Q8N6M8 205 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 SMG7Q92540 1137 aaKnown RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 P2RY12Q9H244 342 aa12.87□□□□□ -0.35
SCAF4-201ENST00000286835 RANGRFQ9HD47 186 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF282Q9UDV7 671 aaPredicted RBP12.87□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF840PA6NDX5 716 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 M0R082 166 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 HLA-EP13747 358 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 GRK5P34947 590 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 MAGEA11P43364 429 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 CBX2Q14781 532 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 AGTRAPQ6RW13 159 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 TAS1R1Q7RTX1 841 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 VRK3Q8IV63 474 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 WBP2Q969T9 261 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 CIDECQ96AQ7 238 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 SLC22A4Q9H015 551 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 TMEM45AQ9NWC5 275 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 SEC14L3Q9UDX4 400 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 ABHD14A-ACY1A0A1B0GW23 586 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 GSAPA4D1B5 854 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 ARHGAP33O14559 1287 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 SLC28A2O43868 658 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 POLR2EP19388 210 aaKnown RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 CD6P30203 668 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 HOXA9P31269 272 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 TAS2R50P59544 299 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 SPHARQ15513 63 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 TCEA2Q15560 299 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 NXNL2Q5VZ03 156 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 CD300LGQ6UXG3 332 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 SUN5Q8TC36 379 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 KLHL6Q8WZ60 621 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 SERHLQ9NQF3 203 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 A0A1W2PRB8 838 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 YES1P07947 543 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 MYL9P24844 172 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 BUD31P41223 144 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 CLEC12AQ5QGZ9 265 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 COX20Q5RI15 118 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 PPP2R2DQ66LE6 453 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 RSPO2Q6UXX9 243 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 KRT74Q7RTS7 529 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 GHDCQ8N2G8 530 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF366Q8N895 744 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 EXOSC8Q96B26 276 aaKnown RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 FYTTD1Q96QD9 318 aaKnown RBP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 KLHL1Q9NR64 748 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCAF4-201ENST00000286835 GSTK1Q9Y2Q3 226 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 HSPB11Q9Y547 144 aa12.86□□□□□ -0.35
SCAF4-201ENST00000286835 MEIOCA2RUB1 952 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 PDE9AO76083 593 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 PCDH8O95206 1070 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 XKP51811 444 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 KIAA0040Q15053 153 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 SMU1Q2TAY7 513 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 SHFQ7M4L6 423 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF461Q8TAF7 563 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 EID2BQ96D98 161 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 DKK3Q9UBP4 350 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF222Q9UK12 451 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ENTPD6O75354 484 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 CAV3P56539 151 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 SELENOWP63302 87 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 RPS26P11Q5JNZ5 115 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF852Q6ZMS4 543 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 Q6ZVL8 140 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 PLD4Q96BZ4 506 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 PDLIM5Q96HC4 596 aaKnown RBP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 IGSF21Q96ID5 467 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 FRMD6Q96NE9 622 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 FAM83DQ9H4H8 585 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ERVW-1Q9UQF0 538 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 NME6O75414 186 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 CH25HO95992 272 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 NR2F1P10589 423 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 EIF4EBP2Q13542 120 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 SLBPQ14493 270 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCAF4-201ENST00000286835 MED27Q6P2C8 311 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 PAMR1Q6UXH9 720 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 CEACAM20Q6UY09 585 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 ASB18Q6ZVZ8 466 aa12.85□□□□□ -0.35
SCAF4-201ENST00000286835 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms