RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 B8ZZF3 427 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 POLR1CO15160 346 aaPredicted RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 ARHGEF9O43307 516 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 DIRAS1O95057 198 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 B3GALT4O96024 378 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 MAPK9P45984 424 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 LIMS1P48059 325 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 ALDH9A1P49189 494 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 HMGA2P52926 109 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.96□□□□□ -0.82
SKA1-201ENST00000285116 TARDBPQ13148 414 aaKnown RBP eCLIP9.96□□□□□ -0.82
SKA1-201ENST00000285116 RGNQ15493 299 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 XKRXQ6PP77 449 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 PRSS55Q6UWB4 352 aaPredicted RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 RNF180Q86T96 592 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 RNF130Q86XS8 419 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 KRT73Q86Y46 540 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 FAM20CQ8IXL6 584 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 REM2Q8IYK8 340 aaPredicted RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 OR5H6Q8NGV6 325 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 BCL7CQ8WUZ0 217 aaPredicted RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 FYTTD1Q96QD9 318 aaKnown RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 COQ7Q99807 217 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 SLC22A4Q9H015 551 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 ATP13A2Q9NQ11 1180 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 PLSCR2Q9NRY7 297 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 ZNF282Q9UDV7 671 aaPredicted RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 NUFIP1Q9UHK0 495 aaKnown RBP9.96□□□□□ -0.82
SKA1-201ENST00000285116 ATP6V1HQ9UI12 483 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 MAFFQ9ULX9 164 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 KLHL20Q9Y2M5 609 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 SNX8Q9Y5X2 465 aa9.96□□□□□ -0.82
SKA1-201ENST00000285116 ZNF780AO75290 641 aaPredicted RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 PTHP01270 115 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 VIPP01282 170 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 PIPP12273 146 aaPredicted RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 CCL5P13501 91 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 COX7A2P14406 83 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 ITGB8P26012 769 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 IL12RB1P42701 662 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 CDH18Q13634 790 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 TCTN1Q2MV58 587 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 LHX8Q68G74 356 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 USP45Q70EL2 814 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 OTOP2Q7RTS6 562 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 PLCZ1Q86YW0 608 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 C11orf65Q8NCR3 313 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 VPS37AQ8NEZ2 397 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 DUSP26Q9BV47 211 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 ZNF717Q9BY31 904 aaPredicted RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 ROGDIQ9GZN7 287 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 TMEM38AQ9H6F2 299 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 NDUFAF4Q9P032 175 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 SNX7Q9UNH6 387 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 A0A0X1KG70 313 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 C2orf78A6NCI8 922 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 CCDC182A6NF36 153 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 K7ERQ8 282 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 TFECO14948 347 aaPredicted RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 SMAD6O43541 496 aaKnown RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 MPZL2O60487 215 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 GCM2O75603 506 aaPredicted RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 SLCO2B1O94956 709 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 ALPPP05187 535 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 STSP08842 583 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 GSTM1P09488 218 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 DCDC1P59894 354 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 RAE1P78406 368 aaKnown RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 SCN1BQ07699 218 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 CHIT1Q13231 466 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 SPIN4Q56A73 249 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 PDE12Q6L8Q7 609 aaKnown RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 TMPRSS11AQ6ZMR5 421 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 IDO2Q6ZQW0 420 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 ZNF621Q6ZSS3 439 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 SLC30A8Q8IWU4 369 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 TCTE3Q8IZS6 198 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 OR2AP1Q8NGE2 309 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 ZNF461Q8TAF7 563 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 WFDC5Q8TCV5 224 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 LMLNQ96KR4 655 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 BHLHE41Q9C0J9 482 aaPredicted RBP9.95□□□□□ -0.82
SKA1-201ENST00000285116 CERS4Q9HA82 394 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 AMBNQ9NP70 447 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 MUTYHQ9UIF7 546 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 FZD4Q9ULV1 537 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 VPS4AQ9UN37 437 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 V9GYH0 126 aa9.95□□□□□ -0.82
SKA1-201ENST00000285116 A0A1W2PQ45 241 aaPredicted RBP9.94□□□□□ -0.82
SKA1-201ENST00000285116 A0A1W2PQY0 241 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 EFCAB10A6NFE3 127 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 C12orf71A8MTZ7 269 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 SHOXO15266 292 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 YY2O15391 372 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 CPNE3O75131 537 aaKnown RBP9.94□□□□□ -0.82
SKA1-201ENST00000285116 PSIP1O75475 530 aaKnown RBP9.94□□□□□ -0.82
SKA1-201ENST00000285116 TNFRSF21O75509 655 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 HSMCR30P0CW71 290 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms