RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 NDUFA9Q16795 377 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 DNAL1Q4LDG9 190 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 DEFB134Q4QY38 66 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 GARNL3Q5VVW2 1013 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 RBM44Q6ZP01 1051 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 B3GNT8Q7Z7M8 397 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 RIMKLAQ8IXN7 391 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 ZBTB18Q99592 522 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 NPAS2Q99743 824 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 EFCAB1Q9HAE3 211 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 FANCEQ9HB96 536 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 MYNNQ9NPC7 610 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 TOR4AQ9NXH8 423 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 SERTAD3Q9UJW9 196 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 HYKKA2RU49 373 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 FAM234BA2RU67 622 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 LRATO95237 230 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 CERS1P27544 350 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 POLR2JP52435 117 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 CLNS1AP54105 237 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 SLAMF1Q13291 335 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 CCDC157Q569K6 752 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 REP15Q6BDI9 236 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 MRM1Q6IN84 353 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 IKBIPQ70UQ0 350 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 TMEM132CQ8N3T6 1108 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 OR1L3Q8NH93 324 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 CDC26Q8NHZ8 85 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 TM4SF18Q96CE8 201 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 SERINC2Q96SA4 455 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 CLMPQ9H6B4 373 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 MAPRE3Q9UPY8 281 aa17.94■□□□□ 0.46
PDLIM3-202ENST00000284770 CROCCQ5TZA2 2017 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 BBIP1A8MTZ0 92 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 GALR3O60755 368 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 FAM58BPP0C7Q3 252 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 ITGA1P56199 1179 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 FAM53BQ14153 422 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 VPS26BQ4G0F5 336 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 FAM71E1Q6IPT2 247 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 RETREG3Q86VR2 466 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 GPR135Q8IZ08 494 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 DSELQ8IZU8 1212 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 TTC29Q8NA56 475 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 GFM2Q969S9 779 aaKnown RBP17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 TESCQ96BS2 214 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 SPDL1Q96EA4 605 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 C10orf90Q96M02 699 aa17.93■□□□□ 0.46
PDLIM3-202ENST00000284770 AKAP10O43572 662 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 IL1RNP18510 177 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 CCKBRP32239 447 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 CSTF2P33240 577 aaKnown RBP eCLIP17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 KCNK10P57789 538 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 INSM1Q01101 510 aaPredicted RBP17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 FAM214AQ32MH5 1076 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 TLDC1Q6P9B6 456 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 PRSS41Q7RTY9 318 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 PDSS2Q86YH6 399 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 AGBL5Q8NDL9 886 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 NUDT8Q8WV74 236 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 STARD8Q92502 1023 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 RAB3IPQ96QF0 476 aaPredicted RBP17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 ANKHQ9HCJ1 492 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 SIDT1Q9NXL6 827 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 NAALAD2Q9Y3Q0 740 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 ASB4Q9Y574 426 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 SPEGQ15772 3267 aa17.92■□□□□ 0.46
PDLIM3-202ENST00000284770 A0A1W2PP18 115 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 DYTNA2CJ06 578 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 ASPDHA6ND91 283 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 B3GALT2O43825 422 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 IL3P08700 152 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 C2orf80Q0P641 193 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 C16orf72Q14CZ0 275 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 MUM1Q2TAK8 710 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 MMEL1Q495T6 779 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 COQ5Q5HYK3 327 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 NIPAL1Q6NVV3 410 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 DEFB124Q8NES8 71 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 OR6C1Q96RD1 312 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 LYARQ9NX58 379 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 EXO1Q9UQ84 846 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 NDUFAF1Q9Y375 327 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 ZFHX2Q9C0A1 2572 aaPredicted RBP17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 ADAMTS20P59510 1910 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 MRASO14807 208 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 SCAMP2O15127 329 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 GUCY1B2O75343 617 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 MED26O95402 600 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 IL6P05231 212 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 CDK4P11802 303 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 PGM1P36871 562 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 HPCAL1P37235 193 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 GCGRP47871 477 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 SKP1P63208 163 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 KLC1Q07866 573 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 FOXM1Q08050 763 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 HEPACAMQ14CZ8 416 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 UGT8Q16880 541 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 DPY19L1Q2PZI1 675 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms