RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 AIMP2Q13155 320 aaKnown RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 CASP8Q14790 479 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PCLAFQ15004 111 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 IMPG1Q17R60 797 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 BTBD16Q32M84 506 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 GGTA1PQ4G0N0 100 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 LACTB2Q53H82 288 aaPredicted RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 TCHHL1Q5QJ38 904 aaPredicted RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 DCAF10Q5QP82 559 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 OR4C11Q6IEV9 310 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 KIRREL2Q6UWL6 708 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ZCCHC23Q6ZST2 131 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 FRMD7Q6ZUT3 714 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 SH2D5Q6ZV89 423 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PTRH1Q86Y79 214 aaKnown RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 EXD3Q8N9H8 876 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ACOT4Q8N9L9 421 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 OR11G2Q8NGC1 345 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 CDC26Q8NHZ8 85 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 MGARPQ8TDB4 240 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ADAMTS18Q8TE60 1221 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 TSLPQ969D9 159 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ABHD17AQ96GS6 310 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 THOC3Q96J01 351 aaKnown RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 PKNOX2Q96KN3 472 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PTCHD1Q96NR3 888 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 KCNA7Q96RP8 456 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ZNF382Q96SR6 550 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 SERPINI1Q99574 410 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 MESP1Q9BRJ9 268 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 TBCDQ9BTW9 1192 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 NTMT1Q9BV86 223 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 TMEM109Q9BVC6 243 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 C1QTNF3Q9BXJ4 246 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 MRPL1Q9BYD6 325 aaKnown RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 TGIF2Q9GZN2 237 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 AICDAQ9GZX7 198 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 GSTO2Q9H4Y5 243 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 MLXIPLQ9NP71 852 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 ATP13A2Q9NQ11 1180 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PRTFDC1Q9NRG1 225 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 FARSBQ9NSD9 589 aaKnown RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 RIC8BQ9NVN3 520 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 OXSMQ9NWU1 459 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 NMRK1Q9NWW6 199 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 MKS1Q9NXB0 559 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 GPR83Q9NYM4 423 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 AHSPQ9NZD4 102 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 TP53TG5Q9Y2B4 290 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 PLLPQ9Y342 182 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 TIMM22Q9Y584 194 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 HEMK1Q9Y5R4 338 aaPredicted RBP6.16□□□□□ -1.42
CD44-204ENST00000279452 CEP295Q9C0D2 2601 aa6.16□□□□□ -1.42
CD44-204ENST00000279452 IGHV1-45A0A0A0MS14 117 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 MYOCOSA0A1B0GUC4 107 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 FOXE1O00358 373 aaPredicted RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 MANBAO00462 879 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 PLPP1O14494 284 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 PCDH17O14917 1159 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 TRIM13O60858 407 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 ULK1O75385 1050 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 ETHE1O95571 254 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 ESRRBO95718 433 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 HSPA4LO95757 839 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 TBX6O95947 436 aaPredicted RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 CHEK2O96017 543 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 HPP00738 406 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 ENO1P06733 434 aaKnown RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 SMIM10L1P0DMW3 83 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 COX6A1P12074 109 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 TNNI3P19429 210 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 HIST1H1TP22492 207 aaPredicted RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 TLX1P31314 330 aaPredicted RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 BUD31P41223 144 aaPredicted RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 HTR6P50406 440 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 LIM2P55344 173 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 DNAJB13P59910 316 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 NAA20P61599 178 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 BTG2P78543 158 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 ID2Q02363 134 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 BTKQ06187 659 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 PCDH1Q08174 1060 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 STX4Q12846 297 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 SLAMF1Q13291 335 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 RUNX2Q13950 521 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 E2F2Q14209 437 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 ADPRMQ3LIE5 342 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 SFT2D3Q587I9 215 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 COLEC12Q5KU26 742 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 SPDYAQ5MJ70 313 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 BEND6Q5SZJ8 279 aaPredicted RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 CCNYL2Q5T2Q4 361 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 C10orf62Q5T681 223 aaPredicted RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 DEPDC1Q5TB30 811 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 HHATQ5VTY9 493 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 CLEC6AQ6EIG7 209 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 PAPD4Q6PIY7 484 aaKnown RBP6.15□□□□□ -1.42
CD44-204ENST00000279452 PCSK4Q6UW60 755 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 SCIMPQ6UWF3 145 aa6.15□□□□□ -1.42
CD44-204ENST00000279452 ZNF793Q6ZN11 406 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms