RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 COPS4Q9BT78 406 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 BTBD2Q9BX70 525 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 THSD1Q9NS62 852 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 BTBD3Q9Y2F9 522 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 POFUT2Q9Y2G5 429 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 UGT2A1Q9Y4X1 527 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 KCNE2Q9Y6J6 123 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 CACNA1IQ9P0X4 2223 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 PIKFYVEQ9Y2I7 2098 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TSPAN11A1L157 253 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 CLCA1A8K7I4 914 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TNFRSF11BO00300 401 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 FOXE1O00358 373 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 ATP6V1G1O75348 118 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 IFNA14P01570 189 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 DDX6P26196 483 aaKnown RBP eCLIP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TPP2P29144 1249 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 RRM2P31350 389 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 PLA2G5P39877 138 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 RECQLP46063 649 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 NCS1P62166 190 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 NAE1Q13564 534 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 EIF4HQ15056 248 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 SMN1Q16637 294 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 HENMT1Q5T8I9 393 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 PLEKHG7Q6ZR37 379 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 AHSA2Q719I0 299 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 BTLAQ7Z6A9 289 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 RAVER1Q8IY67 606 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 C1orf52Q8N6N3 182 aaKnown RBP12.38□□□□□ -0.43
C9orf3-201ENST00000277198 OR7G3Q8NG95 312 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 HCAR2Q8TDS4 363 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 WDR34Q96EX3 536 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 FOPNLQ96NB1 174 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 BBS2Q9BXC9 721 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 LINC00597Q9H2U6 94 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 DSN1Q9H410 356 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 TMEM38AQ9H6F2 299 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 RASSF1Q9NS23 344 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 OBP2AQ9NY56 170 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 NDUFAF4Q9P032 175 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 SPASTQ9UBP0 616 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
C9orf3-201ENST00000277198 PIEZO1Q92508 2521 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 ZFHX2Q9C0A1 2572 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-201ENST00000277198 SLC5A10A0PJK1 596 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 TMEM247A6NEH6 219 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 TMEM229AB2RXF0 380 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 TOR1BO14657 336 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 AXIN1O15169 862 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 BNIP3LO60238 219 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 MAN1A2O60476 641 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 ATG13O75143 517 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 OLR1P78380 273 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 CDC20Q12834 499 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 SYTL3Q4VX76 610 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 IFI44LQ53G44 452 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 TOR1AIP1Q5JTV8 583 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 MED27Q6P2C8 311 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 USP43Q70EL4 1123 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 DNAJC22Q8N4W6 341 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 OR52N2Q8NGI0 321 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.37□□□□□ -0.43
C9orf3-201ENST00000277198 BTN2A2Q8WVV5 523 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 SHDQ96IW2 340 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 OR4K3Q96R72 315 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 REEP4Q9H6H4 257 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 SP140LQ9H930 580 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 KIF26AQ9ULI4 1882 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-201ENST00000277198 PLXNB3Q9ULL4 1909 aa12.37□□□□□ -0.43
C9orf3-201ENST00000277198 ADAM23O75077 832 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 TNFRSF21O75509 655 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 C1QCP02747 245 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CDK1P06493 297 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 PABPC1P11940 636 aaKnown RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CTHP32929 405 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 PRLHRP49683 370 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CLK1P49759 484 aaKnown RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 HMGA2P52926 109 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF284Q2VY69 593 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF404Q494X3 552 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 HSD11B1LQ7Z5J1 315 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 NAGSQ8N159 534 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 RNF175Q8N4F7 328 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 OXR1Q8N573 874 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 AMER2Q8N7J2 671 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 OR4A15Q8NGL6 344 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 OR4C15Q8NGM1 316 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 OR2A12Q8NGT7 310 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 HUS1BQ8NHY5 278 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 MCFD2Q8NI22 146 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 FAM3CQ92520 227 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 MTERF3Q96E29 417 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CRELD1Q96HD1 420 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 LRIG1Q96JA1 1093 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms