RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 MFSD2AQ8NA29 543 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 INO80EQ8NBZ0 244 aaPredicted RBP11.04□□□□□ -0.64
USP53-201ENST00000274030 OR6N2Q8NGY6 317 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 TMEM80Q96HE8 168 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 PSKH2Q96QS6 385 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 LATO43561 262 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 HCRTR2O43614 444 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 SCO2O43819 266 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 EPOP01588 193 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 ITIH1P19827 911 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 ARSFP54793 590 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 DEFA5Q01523 94 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 MAD2L1BPQ15013 274 aaPredicted RBP11.04□□□□□ -0.64
USP53-201ENST00000274030 CARM1Q86X55 608 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 TMEM41AQ96HV5 264 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 C1orf74Q96LT6 269 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 F2RL3Q96RI0 385 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 HPF1Q9NWY4 346 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 A0A1W2PPL8 197 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 CAPN14A8MX76 684 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 SDHDO14521 159 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 HTRA2O43464 458 aaPredicted RBP11.04□□□□□ -0.64
USP53-201ENST00000274030 ARL6IP5O75915 188 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 HEXBP07686 556 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 HTR1AP08908 422 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 ZNF41P51814 821 aaPredicted RBP11.04□□□□□ -0.64
USP53-201ENST00000274030 RPL26P61254 145 aaKnown RBP11.04□□□□□ -0.64
USP53-201ENST00000274030 PLEKHS1Q5SXH7 462 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 BORCS6Q96GS4 357 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 MSLNLQ96KJ4 702 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 P2RY13Q9BPV8 354 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 MRM3Q9HC36 420 aaKnown RBP11.04□□□□□ -0.64
USP53-201ENST00000274030 GJD2Q9UKL4 321 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 MEMO1Q9Y316 297 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 C3P01024 1663 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 WASHC1A8K0Z3 465 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 WASH3PC4AMC7 463 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 CLEC3AO75596 197 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 CELP19835 753 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 ARSDP51689 593 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 ZNF33AQ06730 810 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 ABRAXAS2Q15018 415 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 WASH2PQ6VEQ5 465 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 MAPK15Q8TD08 544 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 NXPE2Q96DL1 559 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 SHDQ96IW2 340 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 LRRC42Q9Y546 428 aa11.04□□□□□ -0.64
USP53-201ENST00000274030 A0A0U1RQS6 177 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 MYADML2A6NDP7 307 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 IGLON5A6NGN9 336 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 MAFKO60675 156 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 VNN2O95498 520 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 S100A1P23297 94 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 CAPZA1P52907 286 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 PER3P56645 1201 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 SLAMF1Q13291 335 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 RAB30Q15771 203 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 RTP2Q5QGT7 225 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 TMEM236Q5W0B7 351 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 KCTD9Q7L273 389 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 OR4N5Q8IXE1 308 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 SHKBP1Q8TBC3 707 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 NSMAFQ92636 917 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 SLC7A6OSQ96CW6 309 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 OTUB2Q96DC9 234 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ZNF382Q96SR6 550 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 DKKL1Q9UK85 242 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ATXN7L1Q9ULK2 861 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 A8MV72 311 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 HSPA12AO43301 675 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ADH1BP00325 375 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 SPARCP09486 303 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 CD9P21926 228 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ACRV1P26436 265 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 VIPR2P41587 438 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 MAP2K4P45985 399 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 NR0B1P51843 470 aaKnown RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 DNAJB13P59910 316 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 C18orf21Q32NC0 220 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 TECRLQ5HYJ1 363 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 APCDD1Q8J025 514 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 FANK1Q8TC84 345 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 CASTOR1Q8WTX7 329 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 TGM7Q96PF1 710 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ORAI3Q9BRQ5 295 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 POLDIP3Q9BY77 421 aaKnown RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 SLC2A4RGQ9NR83 387 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 PRTFDC1Q9NRG1 225 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 S1PR4O95977 384 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 C1GALT1C1LP0DN25 315 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 GADD45AP24522 165 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 SLC6A6P31641 620 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 POU6F2P78424 691 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 KCNAB2Q13303 367 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ATXN7L3Q14CW9 347 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 TRAM2Q15035 370 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 UNC50Q53HI1 259 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 IER5LQ5T953 404 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 PYHIN1Q6K0P9 492 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 USP53Q70EK8 1073 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms