RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 ARHGEF33A8MVX0 844 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 G3V2L1 256 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 HMGN1P05114 100 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 ACADVLP49748 655 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 ARFIP1P53367 373 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 GFOD2Q3B7J2 385 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 IQCCQ4KMZ1 466 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 ACVR1CQ8NER5 493 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 NUP43Q8NFH3 380 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 L3HYPDHQ96EM0 354 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 KCNS3Q9BQ31 491 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 GPRC5BQ9NZH0 403 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 RARRES3Q9UL19 164 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 SLC30A4O14863 429 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 CPNE3O75131 537 aaKnown RBP13.17□□□□□ -0.3
NPC1-201ENST00000269228 TSC22D2O75157 780 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 HMGA1P17096 107 aaKnown RBP13.17□□□□□ -0.3
NPC1-201ENST00000269228 OR1E2P47887 323 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
NPC1-201ENST00000269228 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 TMEM31Q5JXX7 168 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 GATSQ8NAP1 163 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.17□□□□□ -0.35e-8■■■□□ 17.3
NPC1-201ENST00000269228 KHSRPQ92945 711 aaKnown RBP eCLIP13.17□□□□□ -0.3
NPC1-201ENST00000269228 PRODH2Q9UF12 536 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 HS3ST2Q9Y278 367 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 PRSS21Q9Y6M0 314 aa13.17□□□□□ -0.3
NPC1-201ENST00000269228 MARF1Q9Y4F3 1742 aaKnown RBP13.17□□□□□ -0.3
NPC1-201ENST00000269228 A0A096LPI6 279 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 ATXN1LP0C7T5 689 aaKnown RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 GNALP38405 381 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 MZT2BQ6NZ67 158 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 SLCO6A1Q86UG4 719 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 NT5C3BQ969T7 300 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 MOAP1Q96BY2 351 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 EPYCQ99645 322 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PKP2Q99959 881 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 TBC1D17Q9HA65 648 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PLEKHA1Q9HB21 404 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 CA5BQ9Y2D0 317 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 TMA7Q9Y2S6 64 aaKnown RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 COMMD3-BMI1R4GMX3 469 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 DAPL1A0PJW8 107 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 H3BNC9 293 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 BCAS2O75934 225 aaPredicted RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 GP1BBP13224 206 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 CTGFP29279 349 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 STAT5AP42229 794 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 MRPS21P82921 87 aaKnown RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 LAPTM4AQ15012 233 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PTPRRQ15256 657 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 ALPK1Q96QP1 1244 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 MARCH7Q9H992 704 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PAK6Q9NQU5 681 aaPredicted RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 HAT1O14929 419 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 GSTM3P21266 225 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 MAOBP27338 520 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 DNASE1L1P49184 302 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 CCNIQ14094 377 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 KANK2Q63ZY3 851 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PGBD5Q8N414 524 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 OR2AJ1Q8NGZ0 328 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 DGCR14Q96DF8 476 aaKnown RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 DEFB126Q9BYW3 111 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 MCCC2Q9HCC0 563 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 TCRBV5S1A1TA0A578 114 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 CH25HO95992 272 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PRKACGP22612 351 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 RNF144AP50876 292 aaPredicted RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 TAB1Q15750 504 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 TMEM107Q6UX40 140 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 HMGN2P46Q86SG4 172 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PDZD3Q86UT5 571 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 TDHQ8IZJ6 230 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 LRRC25Q8N386 305 aaPredicted RBP13.16□□□□□ -0.3
NPC1-201ENST00000269228 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 PEX11GQ96HA9 241 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 MCHR1Q99705 422 aa13.16□□□□□ -0.3
NPC1-201ENST00000269228 C9P02748 559 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 KLHL22Q53GT1 634 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 AQP11Q8NBQ7 271 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 ANKMY1Q9P2S6 941 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 POFUT2Q9Y2G5 429 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 BCORQ6W2J9 1755 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 PAPPA2Q9BXP8 1791 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 EMC8O43402 210 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 C4BPBP20851 252 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 FPR1P21462 350 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 CCR7P32248 378 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 RPS26P62854 115 aaKnown RBP13.15□□□□□ -0.3
NPC1-201ENST00000269228 CD47Q08722 323 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 GRM7Q14831 915 aa13.15□□□□□ -0.3
NPC1-201ENST00000269228 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms