RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 NCR1O76036 304 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 S1PR4O95977 384 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 IFNA14P01570 189 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 SLC2A2P11168 524 aaPredicted RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 SLC2A4P14672 509 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 POU2F1P14859 743 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 BTF3P20290 206 aaKnown RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 MAOBP27338 520 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 DMC1Q14565 340 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 TSNQ15631 228 aaKnown RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 RBBP7Q16576 425 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 FAHD1Q6P587 224 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 BCDIN3DQ7Z5W3 292 aaKnown RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 PDZD3Q86UT5 571 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 PAQR7Q86WK9 346 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ZSWIM9Q86XI8 627 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CILP2Q8IUL8 1156 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 PPHLN1Q8NEY8 458 aaKnown RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 MDGA1Q8NFP4 955 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 OR7G3Q8NG95 312 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 UTP15Q8TED0 518 aaKnown RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 SLC13A3Q8WWT9 602 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 RNF34Q969K3 372 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 AP2M1Q96CW1 435 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 FAM193BQ96PV7 902 aaPredicted RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 NIPSNAP1Q9BPW8 284 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 DPH7Q9BTV6 452 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 PITHD1Q9GZP4 211 aaPredicted RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 MCOLN1Q9GZU1 580 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CATSPERZQ9NTU4 200 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 COMMD3Q9UBI1 195 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 TRPM7Q96QT4 1865 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CDH23Q9H251 3354 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 PRAMEF33A0A0G2JMD5 474 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 A0A1B0GVC2 190 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 MBLAC1A4D2B0 266 aaPredicted RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 A6NIN4 97 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ARNTLO00327 626 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 PRAMEF10O60809 474 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 SCELO95171 688 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 TFPIP10646 304 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 RAB3AP20336 220 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 LHCGRP22888 699 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 PTX3P26022 381 aaPredicted RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 DNAJA1P31689 397 aaKnown RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 GKP32189 559 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CAPZA2P47755 286 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 CTBP2P56545 445 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 LILRA4P59901 499 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ERVPABLB-1P60509 514 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ADIGQ0VDE8 80 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 UBXN11Q5T124 520 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ERICH5Q6P6B1 374 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ADGRD2Q7Z7M1 963 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 BEST4Q8NFU0 473 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 OR52J3Q8NH60 311 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 ZNF707Q96C28 371 aaPredicted RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 DPH2Q9BQC3 489 aaPredicted RBP8.42□□□□□ -1.06
VAPB-201ENST00000265619 ALPK3Q96L96 1907 aa8.42□□□□□ -1.06
VAPB-201ENST00000265619 LRRC37A2A6NM11 1700 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 LOC105369274A0A096LPK9 316 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 LCHNA4D1U4 455 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 PTGESO14684 152 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 ECI2O75521 394 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 PDE9AO76083 593 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 BEST1O76090 585 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 FPR1P21462 350 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 GGT2P36268 569 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 ZNF91Q05481 1191 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 SERTAD2Q14140 314 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 FGL2Q14314 439 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 FAM187BQ17R55 369 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 EXOC3L2Q2M3D2 409 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 LIPKQ5VXJ0 399 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 C22orf42Q6IC83 251 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 TMEM91Q6ZNR0 172 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 OR4N4Q8N0Y3 316 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 GHDCQ8N2G8 530 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 PCSK9Q8NBP7 692 aaKnown RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 OR6P1Q8NGX9 317 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 WDR89Q96FK6 387 aaPredicted RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 SENP5Q96HI0 755 aaPredicted RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 ZSWIM3Q96MP5 696 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 P2RY13Q9BPV8 354 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 RGS18Q9NS28 235 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 EIF2B4Q9UI10 523 aaKnown RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 FKBP7Q9Y680 259 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 CSNK1G3Q9Y6M4 447 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 CASP8AP2Q9UKL3 1982 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 TET1Q8NFU7 2136 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 FFAR3O14843 346 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 GPR42O15529 346 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 TSPAN12O95859 305 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 HBQ1P09105 142 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 SDC2P34741 201 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 HK3P52790 923 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 FBXO43Q4G163 708 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 CNIH2Q6PI25 160 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 B3GLCTQ6Y288 498 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms