RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 LAMA1P25391 3075 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 CERS1P27544 350 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 GSK3BP49841 420 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 CCT8P50990 548 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 MTPNP58546 118 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 SNRPNP63162 240 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 LIPEQ05469 1076 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 TRAP1Q12931 704 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 SLAMF1Q13291 335 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 FLOT2Q14254 428 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 SLC9A5Q14940 896 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 TRIM61Q5EBN2 209 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 CROCCQ5TZA2 2017 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 DNAJC22Q8N4W6 341 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 NCSTNQ92542 709 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 JADE3Q92613 823 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 ZDHHC12Q96GR4 267 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 TCTN2Q96GX1 697 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 TGM7Q96PF1 710 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 GBP5Q96PP8 586 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 PANX1Q96RD7 426 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 RASSF4Q9H2L5 321 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 ALG2Q9H553 416 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 ADAMTS9Q9P2N4 1935 aa21.74■■□□□ 1.07
SMARCB1-201ENST00000263121 ZSCAN9O15535 394 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 B4GAT1O43505 415 aa21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 GSNP06396 782 aa21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 GPLD1P80108 840 aa21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 ZNF655Q8N720 491 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 FAM47BQ8NA70 645 aa21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 AHCYL2Q96HN2 611 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 CPPED1Q9BRF8 314 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 CHRNA10Q9GZZ6 450 aa21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 PCDHAC1Q9H158 963 aa21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 IKZF5Q9H5V7 419 aa21.73■■□□□ 1.07
SMARCB1-201ENST00000263121 LY6G6EA0A0G2JKS1 128 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 ARHGAP33O14559 1287 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 DNAJA2O60884 412 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 CER1O95813 267 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 DRD2P14416 443 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 EFNA1P20827 205 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 BTN3A2P78410 334 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 LPAL2Q16609 132 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 ZC3H12BQ5HYM0 836 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 TMEM214Q6NUQ4 689 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 CSNK1A1LQ8N752 337 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 CIDECQ96AQ7 238 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 PHF12Q96QT6 1004 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 SH3GL1Q99961 368 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 ROGDIQ9GZN7 287 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 COPS7BQ9H9Q2 264 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 U3KQA8 63 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 DUX1O43812 170 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 KRT36O76013 467 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 PSMG1O95456 288 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 ANP32DO95626 131 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 LMNAP02545 664 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 EIF2S1P05198 315 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 PPM1FP49593 454 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 VSX2P58304 361 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 BNIP2Q12982 314 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 SUZ12Q15022 739 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 NDUFAF5Q5TEU4 345 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 ABHD13Q7L211 337 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 MCATQ8IVS2 390 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 FAM181AQ8N9Y4 354 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 GOT1L1Q8NHS2 421 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 ZCCHC10Q8TBK6 192 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 STMN2Q93045 179 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 RNPEPL1Q9HAU8 725 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 LYARQ9NX58 379 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 BCAP29Q9UHQ4 241 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 AP3M1Q9Y2T2 418 aa21.72■■□□□ 1.07
SMARCB1-201ENST00000263121 ARID1BQ8NFD5 2236 aaPredicted RBP21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 IGHV5-51A0A0C4DH38 117 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 SIGLEC6O43699 453 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 GUCY1B2O75343 617 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 CPSF4O95639 269 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 C9P02748 559 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 ZCCHC18P0CG32 403 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 PNLIPP16233 465 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 DDX5P17844 614 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 GABRA4P48169 554 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 ALDH9A1P49189 494 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 ERFP50548 548 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 CFHR1Q03591 330 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 NR0B2Q15466 257 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 SNCBQ16143 134 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 FXNQ16595 210 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 DEFB110Q30KQ9 67 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 CARFQ8N187 725 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 NATD1Q8N6N6 113 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 OR6C4Q8NGE1 309 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 OR2I1PQ8NGU4 316 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 CCDC74AQ96AQ1 378 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 AURKBQ96GD4 344 aaPredicted RBP21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 KCTD14Q9BQ13 255 aaPredicted RBP21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 CCDC3Q9BQI4 270 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 FAIM2Q9BWQ8 316 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 DCLRE1BQ9H816 532 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms