RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 VASH1Q7L8A9 365 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-202ENST00000262676 DEFB123Q8N688 67 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 SDHAF3Q9NRP4 125 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 Q9Y3F1 56 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 LCHNA4D1U4 455 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 TPPPO94811 219 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 GSTM3P21266 225 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 F8A1P23610 371 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 BMP8BP34820 402 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 SNU13P55769 128 aaKnown RBP12.42□□□□□ -0.42
TTC39A-202ENST00000262676 MOGQ16653 247 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 OR2T5Q6IEZ7 315 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 BMP8AQ7Z5Y6 402 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 OR2T29Q8NH02 315 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 CLEC4CQ8WTT0 213 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 FRZBQ92765 325 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 PLD4Q96BZ4 506 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 GIMAP5Q96F15 307 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 GPR174Q9BXC1 333 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 ARL6Q9H0F7 186 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 SYT4Q9H2B2 425 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 PPIL3Q9H2H8 161 aaKnown RBP12.42□□□□□ -0.42
TTC39A-202ENST00000262676 CDC7O00311 574 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 POLR1CO15160 346 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-202ENST00000262676 TSPAN15O95858 294 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 CHRNA1P02708 482 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 TYRP14679 529 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 ABRAXAS2Q15018 415 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 PON3Q15166 354 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 SLC29A4Q7RTT9 530 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 DPY19L4Q7Z388 723 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 LHFPL3Q86UP9 236 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 IQCKQ8N0W5 287 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 OR7G2Q8NG99 324 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 PYCR2Q96C36 320 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 SULT4A1Q9BR01 284 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 MINDY3Q9H8M7 445 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 MS4A12Q9NXJ0 267 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 LRFN1Q9P244 771 aa12.42□□□□□ -0.42
TTC39A-202ENST00000262676 NDUFS4O43181 175 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 XRCC1P18887 633 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 ELK4P28324 431 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 DGKQP52824 942 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 CLRN1P58418 232 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 Q6ZVU0 165 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 ZNF584Q8IVC4 421 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 IL22RA1Q8N6P7 574 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 RHBDF1Q96CC6 855 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 MSLNLQ96KJ4 702 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 TMEM175Q9BSA9 504 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 TMEM109Q9BVC6 243 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 PAQR5Q9NXK6 330 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 CNTN3Q9P232 1028 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 HEBP2Q9Y5Z4 205 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 TNFP01375 233 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 CDKN2BP42772 138 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 RNF144AP50876 292 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 SLBPQ14493 270 aaKnown RBP eCLIP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 TMEM209Q96SK2 561 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 SDCBP2Q9H190 292 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 TMED5Q9Y3A6 229 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 PCDHB14Q9Y5E9 798 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 A0A0G2JMP0 313 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 AIPO00170 330 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 CILPO75339 1184 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 SRPRAP08240 638 aaKnown RBP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 CCR8P51685 355 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 HNRNPKP61978 463 aaKnown RBP eCLIP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 SNTA1Q13424 505 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 SH3PXD2AQ5TCZ1 1133 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 GPAT4Q86UL3 456 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 ZC3HC1Q86WB0 502 aaKnown RBP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 PM20D2Q8IYS1 436 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 OR4M2Q8NGB6 313 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 DNAJA3Q96EY1 480 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 P2RY13Q9BPV8 354 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 AGXT2Q9BYV1 514 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 NSUN3Q9H649 340 aaKnown RBP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 ANKHQ9HCJ1 492 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 ASB3Q9Y575 518 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 PDE4DIPQ5VU43 2346 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 DUXAA6NLW8 204 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 RFPL1O75677 317 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 NUDT7P0C024 238 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 H2AFB2P0C5Z0 115 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 HCAR3P49019 387 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 ERVK-8P63133 956 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 FOXK1P85037 733 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 MBOAT1Q6ZNC8 495 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 C3orf58Q8NDZ4 430 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 JPH3Q8WXH2 748 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-202ENST00000262676 PSMG2Q969U7 264 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 TSSK6Q9BXA6 273 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 EEF1E1-BLOC1S5C9J1V9 151 aa12.41□□□□□ -0.42
TTC39A-202ENST00000262676 TGFB1I1O43294 461 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms