RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 KCNA7Q96RP8 456 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 RNF38Q9H0F5 515 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 NLGN3Q9NZ94 848 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 HSPB11Q9Y547 144 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 ZNF860A6NHJ4 632 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 H3BSA7 217 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 H7C417 338 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 CREG1O75629 220 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 HRGP04196 525 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 FOXN2P32314 431 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 TUBA4AP68366 448 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 MRPL49Q13405 166 aaKnown RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 FLYWCH1Q4VC44 716 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 ADGRF1Q5T601 910 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 MSL3Q8N5Y2 521 aaKnown RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 MMABQ96EY8 250 aaPredicted RBP13.8□□□□□ -0.2
CUX2-201ENST00000261726 TIGARQ9NQ88 270 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 MS4A12Q9NXJ0 267 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 ZIM2Q9NZV7 527 aa13.8□□□□□ -0.2
CUX2-201ENST00000261726 CXorf49A8MYA2 514 aaPredicted RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 TMEM63AO94886 807 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 H2BFMP0C1H6 154 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 HLA-EP13747 358 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 ZNF776Q68DI1 518 aaPredicted RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 FBXL22Q6P050 247 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TMPPEQ6ZT21 453 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TICAM1Q8IUC6 712 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 OR51G2Q8NGK0 314 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 OR6Q1Q8NGQ2 317 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 JPH3Q8WXH2 748 aaPredicted RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 OSTF1Q92882 214 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 RAB8BQ92930 207 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 PKP2Q99959 881 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 FBP2O00757 339 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 SCO2O43819 266 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 FARS2O95363 451 aaKnown RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 GSTM2P28161 218 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 MLC1Q15049 377 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 LRRC57Q8N9N7 239 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 FBXL20Q96IG2 436 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 SLC39A1Q9NY26 324 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 RNF6Q9Y252 685 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 ZNF81P51508 661 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 GAS6Q14393 721 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 DPYSL2Q16555 572 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 ZBED5Q49AG3 693 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 HMGN2P46Q86SG4 172 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 ELP5Q8TE02 316 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 HDAC2Q92769 488 aaKnown RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 C17orf62Q9BQA9 187 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 RGCCQ9H4X1 137 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 PCDHGB6Q9Y5F9 930 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 UPK3BL1B0FP48 263 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 UPK3BL2E5RIL1 263 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 LRRN3E7EW58 273 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 SWT1Q5T5J6 900 aaKnown RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 UBE2Q1Q7Z7E8 422 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 LINC00471Q8N535 108 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 MAPK15Q8TD08 544 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 LRRN3Q9H3W5 708 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 OR2S2Q9NQN1 319 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TAS2R3Q9NYW6 316 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TAS2R1Q9NYW7 299 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 hCG_1807616A0A1W2PRN6 198 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 GRPRP30550 384 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 PREPP48147 710 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 OLIG2Q13516 323 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TMEM236Q5W0B7 351 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TPGS2Q68CL5 300 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TMIGD1Q6UXZ0 262 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 CELF5Q8N6W0 485 aaKnown RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
CUX2-201ENST00000261726 OR1F2PQ96R84 312 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 TMEM185BQ9H7F4 350 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 COL20A1Q9P218 1284 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 SLC7A11Q9UPY5 501 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 WDR45Q9Y484 360 aa13.79□□□□□ -0.2
CUX2-201ENST00000261726 FLRT2O43155 660 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 ATP6V1G1O75348 118 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CBSLP0DN79 551 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CBSP35520 551 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 PBX1P40424 430 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 SLC9A3P48764 834 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 KCNQ1P51787 676 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 TEAD2Q15562 447 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 KCNN1Q92952 543 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 KIAA1143Q96AT1 154 aaPredicted RBP13.78□□□□□ -0.2
CUX2-201ENST00000261726 ACTL8Q9H568 366 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 CIB4A0PJX0 185 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 SOWAHBA6NEL2 793 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 PET100P0DJ07 73 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 IFNGR1P15260 489 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 S1PR1P21453 382 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 VSX2P58304 361 aaPredicted RBP13.78□□□□□ -0.2
CUX2-201ENST00000261726 ZNF550Q7Z398 422 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 NPAS3Q8IXF0 933 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 SSX3Q99909 188 aa13.78□□□□□ -0.2
CUX2-201ENST00000261726 GPR88Q9GZN0 384 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms