RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 OPCMLQ14982 345 aa12.53□□□□□ -0.4
TMEM260-201ENST00000261556 ATXN7L3Q14CW9 347 aaPredicted RBP12.53□□□□□ -0.4
TMEM260-201ENST00000261556 NTRK2Q16620 822 aa12.53□□□□□ -0.4
TMEM260-201ENST00000261556 USP39Q53GS9 565 aaKnown RBP12.53□□□□□ -0.4
TMEM260-201ENST00000261556 GALNT10Q86SR1 603 aa12.53□□□□□ -0.4
TMEM260-201ENST00000261556 TMEM185AQ8NFB2 350 aa12.53□□□□□ -0.4
TMEM260-201ENST00000261556 KAT2AQ92830 837 aa12.53□□□□□ -0.4
TMEM260-201ENST00000261556 SCLYQ96I15 445 aa12.53□□□□□ -0.4
TMEM260-201ENST00000261556 TRPC4Q9UBN4 977 aa12.53□□□□□ -0.4
TMEM260-201ENST00000261556 A0A1W2PQH9 124 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 SERPINA3P01011 423 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 NR2F6P10588 404 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 RHCEP18577 417 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 KIR2DL3P43628 341 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 GSTM5P46439 218 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 HOXA1P49639 335 aaPredicted RBP12.52□□□□□ -0.4
TMEM260-201ENST00000261556 SNRPEP62304 92 aaKnown RBP12.52□□□□□ -0.4
TMEM260-201ENST00000261556 SGCAQ16586 387 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 TOR1AIP1Q5JTV8 583 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 ZNF691Q5VV52 312 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 GPSM1Q86YR5 675 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 MINDY1Q8N5J2 469 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 OR5T2Q8NGG2 359 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 OR52E6Q96RD3 313 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 CERS4Q9HA82 394 aa12.52□□□□□ -0.4
TMEM260-201ENST00000261556 LRATO95237 230 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 CTPS1P17812 591 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 AVPR1BP47901 424 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 CXCR3P49682 368 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 GPRC6AQ5T6X5 926 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF655Q8N720 491 aaPredicted RBP12.52□□□□□ -0.41
TMEM260-201ENST00000261556 HJURPQ8NCD3 748 aaPredicted RBP12.52□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF671Q8TAW3 534 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 ELP4Q96EB1 424 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 KCTD7Q96MP8 289 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.41
TMEM260-201ENST00000261556 H2AFY2Q9P0M6 372 aaPredicted RBP12.52□□□□□ -0.41
TMEM260-201ENST00000261556 CDV3Q9UKY7 258 aaKnown RBP12.52□□□□□ -0.41
TMEM260-201ENST00000261556 PEAK1Q9H792 1746 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 A0A087X1B8 175 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 ST8SIA5O15466 376 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 C22orf31O95567 290 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 TGM6O95932 706 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 HPRP00739 348 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 PFKLP17858 780 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 MASP1P48740 699 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 OR2T5Q6IEZ7 315 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 CXorf57Q6NSI4 855 aaKnown RBP12.52□□□□□ -0.41
TMEM260-201ENST00000261556 SLC30A6Q6NXT4 461 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 FUT10Q6P4F1 479 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 ACVR1CQ8NER5 493 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 OR2T29Q8NH02 315 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 PMM1Q92871 262 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 SFXN2Q96NB2 322 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 NKX6-2Q9C056 277 aaPredicted RBP12.52□□□□□ -0.41
TMEM260-201ENST00000261556 OR51J1Q9H342 316 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 RAD18Q9NS91 495 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 IL20Q9NYY1 176 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 ABCD2Q9UBJ2 740 aa12.52□□□□□ -0.41
TMEM260-201ENST00000261556 BCLAF3A2AJT9 711 aaKnown RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CCL22O00626 93 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 HOXB8P17481 243 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CHI3L1P36222 383 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CASP6P55212 293 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 IRF8Q02556 426 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 SLC3A1Q07837 685 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 COTL1Q14019 142 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ETFRF1Q6IPR1 90 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CNIH2Q6PI25 160 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 MTSS1LQ765P7 747 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF565Q8N9K5 539 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 OR5T3Q8NGG3 340 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 WDR48Q8TAF3 677 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CLSTN3Q9BQT9 956 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 SLC29A3Q9BZD2 475 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 DNTTIP1Q9H147 329 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 EXTL2Q9UBQ6 330 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 MRTO4Q9UKD2 239 aaKnown RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 PCOLCE2Q9UKZ9 415 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 FGBP02675 491 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 FABP3P05413 133 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ADRB1P08588 477 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 PTPN3P26045 913 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 KCNJ3P48549 501 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ISL1P61371 349 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 KLHL22Q53GT1 634 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CDH26Q8IXH8 852 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 MS4A15Q8N5U1 240 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ZMIZ2Q8NF64 920 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 OR1M1Q8NGA1 313 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 STYXQ8WUJ0 223 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 TNFAIP8L1Q8WVP5 186 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 TCEAL4Q96EI5 215 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 UHRF1Q96T88 793 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms