RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PIGWQ7Z7B1 504 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 CATSPERDQ86XM0 798 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 TDHQ8IZJ6 230 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 SYCP3Q8IZU3 236 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 OR4C15Q8NGM1 316 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 CASP10Q92851 521 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 MAGED4Q96JG8 741 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 HNRNPABQ99729 332 aaKnown RBP3.81□□□□□ -1.8
CCDC54-201ENST00000261058 RAB9BQ9NP90 201 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 PNPLA3Q9NST1 481 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 KLHL8Q9P2G9 620 aaPredicted RBP3.81□□□□□ -1.8
CCDC54-201ENST00000261058 SLC12A6Q9UHW9 1150 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 NPHP3Q7Z494 1330 aa3.81□□□□□ -1.8
CCDC54-201ENST00000261058 LRRD1A4D1F6 860 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 RGSL1A5PLK6 1076 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ANKDD1BA6NHY2 528 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 H0YIG0 161 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ACSL4O60488 711 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 TRIM16O95361 564 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 TYMPP19971 482 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 PBLDP30039 288 aaPredicted RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 OPRL1P41146 370 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ACAA2P42765 397 aaKnown RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ASMTP46597 345 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 LBX1P52954 281 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 SNU13P55769 128 aaKnown RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 GSCP56915 257 aaPredicted RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 YBEYP58557 167 aaPredicted RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 RPP38P78345 283 aaKnown RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 IRX4P78413 519 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ARF5P84085 180 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 CDH18Q13634 790 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 INAQ16352 499 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ZSCAN26Q16670 478 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 SGSM1Q2NKQ1 1148 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 C15orf52Q6ZUT6 534 aaKnown RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 C5orf24Q7Z6I8 188 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 RABEPKQ7Z6M1 372 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 LRRC49Q8IUZ0 686 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 KLHDC8AQ8IYD2 350 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 RTL3Q8N8U3 475 aaKnown RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 CNNM3Q8NE01 707 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 OR5T2Q8NGG2 359 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ARHGAP45Q92619 1136 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 NXPE2Q96DL1 559 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF486Q96H40 463 aaPredicted RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ART5Q96L15 291 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 TXN2Q99757 166 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 OVOL2Q9BRP0 275 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 HSD3B7Q9H2F3 369 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 POLE3Q9NRF9 147 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ANO10Q9NW15 660 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 QPCTLQ9NXS2 382 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 HACD3Q9P035 362 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 AKAP7Q9P0M2 348 aaPredicted RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 ASIC3Q9UHC3 531 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 PPP1R3CQ9UQK1 317 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 PIN4Q9Y237 131 aaKnown RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 CAB39Q9Y376 341 aaPredicted RBP3.8□□□□□ -1.8
CCDC54-201ENST00000261058 SELENOKQ9Y6D0 94 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 KIAA1217Q5T5P2 1943 aa3.8□□□□□ -1.8
CCDC54-201ENST00000261058 A0A087WZ39 114 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 SERINC4A6NH21 518 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 NKX6-3A6NJ46 265 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF263O14978 683 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 SMPD2O60906 423 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 CLDN1O95832 211 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 C8orf89P0DMQ9 161 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 GZMAP12544 262 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 AADACP22760 399 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 SULT1E1P49888 294 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 NT5C2P49902 561 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 KHKP50053 298 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 ADARP55265 1226 aaKnown RBP3.79□□□□□ -1.8
CCDC54-201ENST00000261058 STX1BP61266 288 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 MECOMQ03112 1051 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 CETN1Q12798 172 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 GRB14Q14449 540 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 MTF1Q14872 753 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 DUSP5Q16690 384 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 HLA-BQ31612 363 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 HSP90AA5PQ58FG0 334 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 ZC2HC1BQ5TFG8 222 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 AP1ARQ63HQ0 302 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 OLFM4Q6UX06 510 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 GSG1LQ6UXU4 331 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 LPCAT2Q7L5N7 544 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 AQP12AQ8IXF9 295 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 ZC3H3Q8IXZ2 948 aaKnown RBP3.79□□□□□ -1.8
CCDC54-201ENST00000261058 CLYBLQ8N0X4 340 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 TMEM99Q8N816 258 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF614Q8N883 585 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 FAM184AQ8NB25 1140 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 OR6S1Q8NH40 331 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 CD99L2Q8TCZ2 262 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 CFAP36Q96G28 342 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 C17orf62Q9BQA9 187 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 CACNG6Q9BXT2 260 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 NYXQ9GZU5 481 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms