RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TAS2R7Q9NYW3 318 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 STX18Q9P2W9 335 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ACANP16112 2415 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PIPSLA2A3N6 862 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF503-AS2A6NEH8 195 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PRMT3O60678 531 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ANXA9O76027 345 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 HGFP14210 728 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ACAA2P42765 397 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 NSG1P42857 185 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 RPS26P62854 115 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PDCD2Q16342 344 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PRICKLE4Q2TBC4 344 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 C19orf48Q6RUI8 117 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 VTCN1Q7Z7D3 282 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 SUGP1Q8IWZ8 645 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 E2F7Q96AV8 911 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC41A2Q96JW4 573 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 LRGUKQ96M69 825 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 F2RL3Q96RI0 385 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 OR51B5Q9H339 312 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 GLIPR2Q9H4G4 154 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 KCNK9Q9NPC2 374 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 NECTIN3Q9NQS3 549 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 RAP2CQ9Y3L5 183 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 MANBAO00462 879 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 HDAC3O15379 428 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 FGF17O60258 216 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 TRIM13O60858 407 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 SERPINE1P05121 402 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 INHBBP09529 407 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 CCT8P50990 548 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 PRDX1Q06830 199 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 BCL2L1Q07817 233 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 LAPTM4AQ15012 233 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 CDYL2Q8N8U2 506 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 GBP7Q8N8V2 638 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 LEMD2Q8NC56 503 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ATP6V1E2Q96A05 226 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 SPATA16Q9BXB7 569 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 IPPKQ9H8X2 491 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 KRCC1Q9NPI7 259 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 OCIAD1Q9NX40 245 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 DEC1Q9P2X7 70 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 TMCO1Q9UM00 188 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 MAPRE3Q9UPY8 281 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 FAM170BA6NMN3 283 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF197O14709 1029 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 LALBAP00709 142 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ALPPL2P10696 532 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 MAGP20916 626 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 REEP5Q00765 189 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF628Q5EBL2 1059 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 RNFT1Q5M7Z0 435 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ABHD17CQ6PCB6 329 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 ERMP1Q7Z2K6 904 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 OR8J2Q8NGG1 315 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 AP2M1Q96CW1 435 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 MRPL48Q96GC5 212 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC38A1Q9H2H9 487 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 CRIM1Q9NZV1 1036 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 TLK1Q9UKI8 766 aa5.29□□□□□ -1.56
TOPBP1-201ENST00000260810 VSTM2BA6NLU5 285 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CYSRT1A8MQ03 144 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 H7BY64 318 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 H2AFYO75367 372 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ACADVLP49748 655 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 IL10RAQ13651 578 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 GATAD2AQ86YP4 633 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 NRSN1Q8IZ57 195 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 METTL4Q8N3J2 472 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 LRIG1Q96JA1 1093 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 PRAP1Q96NZ9 151 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CATSPER2Q96P56 530 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 MAPKAP1Q9BPZ7 522 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ATP13A3Q9H7F0 1226 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 EML4Q9HC35 981 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SENP1Q9P0U3 644 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 A4GNTQ9UNA3 340 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC5A6Q9Y289 635 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 IGHV1OR21-1A0A087WYE8 117 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 DYTNA2CJ06 578 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 MYO1GB0I1T2 1018 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 RGS16O15492 202 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SDC3O75056 442 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 TM7SF2O76062 418 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 HOXB2P14652 356 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ST8SIA6P61647 398 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 OGFRL1Q5TC84 451 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 LPCAT4Q643R3 524 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 MEX3DQ86XN8 651 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CLIP4Q8N3C7 705 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 HDDC3Q8N4P3 179 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 NRBF2Q96F24 287 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 PARVBQ9HBI1 364 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 NMRK1Q9NWW6 199 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 ACOT9Q9Y305 439 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 RWDD3Q9Y3V2 267 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 CLDN4O14493 209 aa5.28□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC31A1O15431 190 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms