RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ZBED6CLQ96FA7 236 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ADAD1Q96M93 576 aaKnown RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 DPH2Q9BQC3 489 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC32A1Q9H598 525 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 C14orf105Q9NVL8 296 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 IFT52Q9Y366 437 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 C6orf47O95873 294 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 TFAP2AP05549 437 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 BMP2P12643 396 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 GCAP28676 217 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 CSKP41240 450 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 KCNQ1P51787 676 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 STC1P52823 247 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 AP1S1P61966 158 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 DSG2Q14126 1118 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 GINS1Q14691 196 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SPHARQ15513 63 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 GPR68Q15743 365 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ATAD3CQ5T2N8 411 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZDHHC20Q5W0Z9 365 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FRG2Q64ET8 278 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC8B1Q6J4K2 584 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FUT10Q6P4F1 479 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 C15orf39Q6ZRI6 1047 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 RNF130Q86XS8 419 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR2T35Q8NGX2 323 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 SHKBP1Q8TBC3 707 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FRG2BQ96QU4 278 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 CLCC1Q96S66 551 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 FOLH1BQ9HBA9 442 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 STUB1Q9UNE7 303 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 BOLA1Q9Y3E2 137 aa9.41□□□□□ -0.9
CTDSPL2-201ENST00000260327 MYO18AQ92614 2054 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 LCHNA4D1U4 455 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 LRRC72A6NJI9 287 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC38A8A6NNN8 435 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 FLRT2O43155 660 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 GTF2F2P13984 249 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 MAGEA11P43364 429 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 SEC23BQ15437 767 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 UNC50Q53HI1 259 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 HMGN2P46Q86SG4 172 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF557Q8N988 423 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 MRPS23Q9Y3D9 190 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 UPK3BL1B0FP48 263 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF878C9JN71 531 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 UPK3BL2E5RIL1 263 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 F8W036 122 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ICMTO60725 284 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 GSTM3P21266 225 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 GRK6P43250 576 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 BLOC1S1P78537 153 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 SNTB2Q13425 540 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZSWIM9Q86XI8 627 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 OTUB2Q96DC9 234 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 C1QTNF7Q9BXJ2 289 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 OCEL1Q9H607 264 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZDHHC7Q9NXF8 308 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 CALML5Q9NZT1 146 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 UGT2A1Q9Y4X1 527 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 C10orf71Q711Q0 1435 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 MEIOCA2RUB1 952 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 SOX2P48431 317 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 MLLT6P55198 1093 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 COX18Q8N8Q8 333 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 PROKR2Q8NFJ6 384 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 RANGRFQ9HD47 186 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 RBPJLQ9UBG7 517 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 P2RX2Q9UBL9 471 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 PCDHGB7Q9Y5F8 929 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 TEX13CA0A0J9YWL9 993 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 CAPN14A8MX76 684 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 LYRM1O43325 122 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 CLDN7O95471 211 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 PAHP00439 452 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 IFNA21P01568 189 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 PCCBP05166 539 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 JUNP05412 331 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 DHRS4L1P0CG22 281 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 CTSEP14091 401 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 OXTRP30559 389 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLBPQ14493 270 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC36A3Q495N2 470 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 SPATS1Q496A3 300 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF227Q86WZ6 799 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 MFSD2AQ8NA29 543 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ELMOD3Q96FG2 381 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 CACNG6Q9BXT2 260 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 BTBD1Q9H0C5 482 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR51E2Q9H255 320 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 EXOSC1Q9Y3B2 195 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-201ENST00000260327 MYO10Q9HD67 2058 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 AGAP5A6NIR3 686 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 TXNL1O43396 289 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 SGCEO43556 437 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 NPPAP01160 153 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms