RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MSANTD1Q6ZTZ1 278 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 CAMKMTQ7Z624 323 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 ARPINQ7Z6K5 226 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 ZNF761Q86XN6 746 aaPredicted RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 HIPK4Q8NE63 616 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 TTLQ8NG68 377 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 C16orf78Q8WTQ4 265 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 STARD8Q92502 1023 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 PAIP1Q9H074 479 aaKnown RBP16.61■□□□□ 0.25
SRSF1-201ENST00000258962 PCDHAC1Q9H158 963 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 LRRN3Q9H3W5 708 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 SLC6A13Q9NSD5 602 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 SLC25A37Q9NYZ2 338 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 VAPAQ9P0L0 249 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 PCDHGA4Q9Y5G9 962 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 AP1M2Q9Y6Q5 423 aa16.61■□□□□ 0.25
SRSF1-201ENST00000258962 GSAPA4D1B5 854 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 OR2A25A4D2G3 310 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 GABRR3A8MPY1 467 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 PPM1DO15297 605 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 SCN2BO60939 215 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 CSO75390 466 aaKnown RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 STATHP02808 62 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 GSTM2P28161 218 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 PTPN6P29350 595 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 AHRP35869 848 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 FASLGP48023 281 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 PPM1FP49593 454 aaPredicted RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 HYAL2Q12891 473 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 SPATS1Q496A3 300 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 GTDC1Q4AE62 458 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 LRIF1Q5T3J3 769 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 FAM71E1Q6IPT2 247 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 DNAJC14Q6Y2X3 702 aaPredicted RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 SPRED1Q7Z699 444 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 GPR180Q86V85 440 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ANKRD46Q86W74 232 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 RBM12BQ8IXT5 1001 aaKnown RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 MFSD9Q8NBP5 474 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 OR8J2Q8NGG1 315 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ANKRD27Q96NW4 1050 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 SLC38A3Q99624 504 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 INPP5KQ9BT40 448 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 AHSPQ9NZD4 102 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ATP6V1HQ9UI12 483 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 CEP295Q9C0D2 2601 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 UNC13CQ8NB66 2214 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 A0A096LPI6 279 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 LRIT2A6NDA9 550 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 TRABD2BA6NFA1 517 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 STAMBPO95630 424 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 LAMP1P11279 417 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 MAGP20916 626 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 HPCAL1P37235 193 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 CDKN2CP42773 168 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 GSK3BP49841 420 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 EEFSECP57772 596 aaKnown RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 OR1D5P58170 312 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 MTPNP58546 118 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 CYP4F3Q08477 520 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ADPRMQ3LIE5 342 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 AMZ1Q400G9 498 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ZNF385BQ569K4 471 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 FCRL6Q6DN72 434 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 UNQ6494/PRO21346Q6UXR6 183 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ZNF438Q7Z4V0 828 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 BHLHE22Q8NFJ8 381 aaPredicted RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 SLC26A7Q8TE54 656 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 COQ8BQ96D53 544 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ITCHQ96J02 903 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.6■□□□□ 0.25
SRSF1-201ENST00000258962 RMND5AQ9H871 391 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 MAPRE3Q9UPY8 281 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 L3MBTL1Q9Y468 752 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 ENTPD2Q9Y5L3 495 aa16.6■□□□□ 0.25
SRSF1-201ENST00000258962 A0A1W2PQM1 296 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 C2orf74A8MZ97 194 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 C4orf51C9J302 202 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 TMX2-CTNND1H3BSU7 103 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 NTN3O00634 580 aaPredicted RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 B4GAT1O43505 415 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 DNAJA2O60884 412 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 ERN1O75460 977 aaKnown RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 SERPIND1P05546 499 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 LSSP48449 732 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 HNRNPFP52597 415 aaKnown RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 TAS2R50P59544 299 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 MC1RQ01726 317 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 LIPEQ05469 1076 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 TRAP1Q12931 704 aaKnown RBP16.59■□□□□ 0.25
SRSF1-201ENST00000258962 PDE7AQ13946 482 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 NR1D2Q14995 579 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 ISXQ2M1V0 245 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 SPESP1Q6UW49 350 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 TBC1D19Q8N5T2 526 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 OR8J3Q8NGG0 315 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 PYDC1Q8WXC3 89 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 GATA6Q92908 595 aa16.59■□□□□ 0.25
SRSF1-201ENST00000258962 RGMAQ96B86 450 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms