RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 NLGN3Q9NZ94 848 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 WASHC1A8K0Z3 465 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 WASH3PC4AMC7 463 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 MATN2O00339 956 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 CD1DP15813 335 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 ABRAXAS2Q15018 415 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 WASH2PQ6VEQ5 465 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 UBQLNLQ8IYU4 475 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 TMCO6Q96DC7 493 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 OR2M4Q96R27 311 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 TRIM36Q9NQ86 728 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 SPATA6Q9NWH7 488 aaPredicted RBP18■□□□□ 0.47
SMARCC1-201ENST00000254480 OR6C70A6NIJ9 312 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 TSPAN4O14817 238 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 ADH7P40394 386 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 WNT7BP56706 349 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 TSGA13Q96PP4 275 aa18■□□□□ 0.47
SMARCC1-201ENST00000254480 FXYD6-FXYD2A0A087WZ82 144 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 CD9P21926 228 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 TBPL1P62380 186 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 DSG2Q14126 1118 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 GALNT12Q8IXK2 581 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 GALNT11Q8NCW6 608 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 LMO3Q8TAP4 145 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 OTUB2Q96DC9 234 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 FXYD6Q9H0Q3 95 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 PTTG2Q9NZH5 202 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 PLATP00750 562 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 KCNC4Q03721 635 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 IRF5Q13568 498 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 ARHGAP9Q9BRR9 750 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 BRF2Q9HAW0 419 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC2A4RGQ9NR83 387 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 FNIP2Q9P278 1114 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 ZNF840PA6NDX5 716 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 L7N2F9 121 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 MAFKO60675 156 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 AOC1P19801 751 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 NAA10P41227 235 aaPredicted RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 VAMP2P63027 116 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 RPS21P63220 83 aaKnown RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 ABHD18Q0P651 414 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM44Q2T9K0 475 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM225Q6GV28 225 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 KCTD9Q7L273 389 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM125Q96AQ2 219 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 TEPSINQ96N21 525 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 CFL2Q9Y281 166 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 BAZ2AQ9UIF9 1905 aaKnown RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 A8MV72 311 aaPredicted RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 PROM1O43490 865 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 ALDOAP04075 364 aaKnown RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 PIK3CBP42338 1070 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC18A1P54219 525 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 CLRN1P58418 232 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 ZXDBP98169 803 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM236Q5W0B7 351 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 CDHR3Q6ZTQ4 885 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 POLDIP3Q9BY77 421 aaKnown RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 GPR34Q9UPC5 381 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 SRPRAP08240 638 aaKnown RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 FPR1P21462 350 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 ACADVLP49748 655 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 ARSDP51689 593 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 LBX1P52954 281 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 POU6F2P78424 691 aaPredicted RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 REEP3Q6NUK4 255 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 SLITRK4Q8IW52 837 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 IMP4Q96G21 291 aaKnown RBP17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 HAPLN2Q9GZV7 340 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 KCNK12Q9HB15 430 aa17.99■□□□□ 0.47
SMARCC1-201ENST00000254480 HTR1AP08908 422 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 DNM1P34Q6PK57 102 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 SERINC5Q86VE9 423 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 CARM1Q86X55 608 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 NPLQ9BXD5 320 aaPredicted RBP17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 SMURF1Q9HCE7 757 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 STYXL1Q9Y6J8 313 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 MAP2K4P45985 399 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 BEND4Q6ZU67 534 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 NLGN4YQ8NFZ3 816 aaPredicted RBP17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 RIT1Q92963 219 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC7A6OSQ96CW6 309 aaPredicted RBP17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM41AQ96HV5 264 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 CD320Q9NPF0 282 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 FTSJ1Q9UET6 329 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 PCDHGA10Q9Y5H3 936 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 CD70P32970 193 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 PON2Q15165 354 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 WDR45BQ5MNZ6 344 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 FIGNL1Q6PIW4 674 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 CMKLR1Q99788 373 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 BOCQ9BWV1 1114 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 C2orf74A8MZ97 194 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 VNN2O95498 520 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 RLN2P04090 185 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 JUNDP17535 347 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 ARPC4P59998 168 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 ZNF630Q2M218 657 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms