RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 J3QKU1 62 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 PRMT3O60678 531 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 SEC24DO94855 1032 aaPredicted RBP23.58■■□□□ 1.37
LSM7-201ENST00000252622 TGFB1P01137 390 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 ATP5F1P24539 256 aaPredicted RBP23.58■■□□□ 1.37
LSM7-201ENST00000252622 ARFIP1P53367 373 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 HERVK_113P63132 956 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 RCN2Q14257 317 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 ZRSR2Q15696 482 aaKnown RBP23.58■■□□□ 1.37
LSM7-201ENST00000252622 ERCC6LQ2NKX8 1250 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 SFT2D3Q587I9 215 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 PLAG1Q6DJT9 500 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 WDR20Q8TBZ3 569 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 PSMF1Q92530 271 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 MAGEB10Q96LZ2 347 aaPredicted RBP23.58■■□□□ 1.37
LSM7-201ENST00000252622 PTCHD1Q96NR3 888 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 CDK15Q96Q40 435 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 CENPKQ9BS16 269 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 ERVK-6Q9BXR3 956 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 PSD3Q9NYI0 1048 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 PPT2Q9UMR5 302 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 DAPP1Q9UN19 280 aa23.58■■□□□ 1.37
LSM7-201ENST00000252622 DOCK10Q96BY6 2186 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 FAM227AF5H4B4 570 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 DLX3O60479 287 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 ATP5A1P25705 553 aaKnown RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 SOX11P35716 441 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 ARL1P40616 181 aaPredicted RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 TSFMP43897 325 aaKnown RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 LIM2P55344 173 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 BTG2P78543 158 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 TLE1Q04724 770 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 CRB2Q5IJ48 1285 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 COLEC12Q5KU26 742 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 C10orf62Q5T681 223 aaPredicted RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 SLC6A19Q695T7 634 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 ZNF793Q6ZN11 406 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 SLC22A9Q8IVM8 553 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 SCUBE1Q8IWY4 988 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 RIBC1Q8N443 379 aaPredicted RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 PNPLA2Q96AD5 504 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 MTERF1Q99551 399 aaKnown RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 LPAR4Q99677 370 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 OR51B5Q9H339 312 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 ZBTB20Q9HC78 741 aaPredicted RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 LYRM4Q9HD34 91 aa23.57■■□□□ 1.36
LSM7-201ENST00000252622 SEMA4BQ9NPR2 832 aaPredicted RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 MRPS33Q9Y291 106 aaKnown RBP23.57■■□□□ 1.36
LSM7-201ENST00000252622 TCRBV16S1A1N1A0A5B0 115 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 FOXE1O00358 373 aaPredicted RBP23.56■■□□□ 1.36
LSM7-201ENST00000252622 SORBS2O94875 1100 aaKnown RBP23.56■■□□□ 1.36
LSM7-201ENST00000252622 OTCP00480 354 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 CELA2AP08217 269 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 HIST1H1TP22492 207 aaPredicted RBP23.56■■□□□ 1.36
LSM7-201ENST00000252622 PTX3P26022 381 aaPredicted RBP23.56■■□□□ 1.36
LSM7-201ENST00000252622 CD97P48960 835 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 OR4D2P58180 307 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 RPS13P62277 151 aaKnown RBP23.56■■□□□ 1.36
LSM7-201ENST00000252622 MFAP5Q13361 173 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 EXT1Q16394 746 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 AP5B1Q2VPB7 878 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 ZNF678Q5SXM1 525 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 PAPD4Q6PIY7 484 aaKnown RBP23.56■■□□□ 1.36
LSM7-201ENST00000252622 ISLR2Q6UXK2 745 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 RNF175Q8N4F7 328 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 ZADH2Q8N4Q0 377 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 ACOT4Q8N9L9 421 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 ARMC2Q8NEN0 867 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 BRIX1Q8TDN6 353 aaKnown RBP23.56■■□□□ 1.36
LSM7-201ENST00000252622 TMEM237Q96Q45 408 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 LMF1Q96S06 567 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 EPS8L2Q9H6S3 715 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 EMCNQ9ULC0 261 aa23.56■■□□□ 1.36
LSM7-201ENST00000252622 FOXO6A8MYZ6 492 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 RTCAO00442 366 aaKnown RBP23.55■■□□□ 1.36
LSM7-201ENST00000252622 SH3BGRLO75368 114 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 ITGAMP11215 1152 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 MAOAP21397 527 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 SSR2P43308 183 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 HSD17B7P56937 341 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 ACTN3Q08043 901 aaPredicted RBP23.55■■□□□ 1.36
LSM7-201ENST00000252622 CUL3Q13618 768 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 BTBD16Q32M84 506 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 RPS27LQ71UM5 84 aaKnown RBP23.55■■□□□ 1.36
LSM7-201ENST00000252622 MILR1Q7Z6M3 343 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 ZNF595Q8IYB9 648 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 MREGQ8N565 214 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 OR4F6Q8NGB9 312 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 OR2W6PQ8NHA6 318 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 PPP4R1Q8TF05 950 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 RGMAQ96B86 450 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 MFRPQ9BY79 579 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 PARD6BQ9BYG5 372 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 NECTIN3Q9NQS3 549 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 KCMF1Q9P0J7 381 aa23.55■■□□□ 1.36
LSM7-201ENST00000252622 SAP18O00422 153 aaKnown RBP23.54■■□□□ 1.36
LSM7-201ENST00000252622 CYR61O00622 381 aa23.54■■□□□ 1.36
LSM7-201ENST00000252622 CLDN4O14493 209 aa23.54■■□□□ 1.36
LSM7-201ENST00000252622 IMPDH1P20839 514 aa23.54■■□□□ 1.36
LSM7-201ENST00000252622 CRHR1P34998 444 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms