RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 CBSP35520 551 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 SRSF11Q05519 484 aaKnown RBP16.28■□□□□ 0.2
FOXA1-201ENST00000250448 VEZF1Q14119 521 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 NDUFA5Q16718 116 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 ZXDCQ2QGD7 858 aaPredicted RBP16.28■□□□□ 0.2
FOXA1-201ENST00000250448 MLIPQ5VWP3 458 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 CLECL1Q8IZS7 167 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 METTL4Q8N3J2 472 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 L3MBTL4Q8NA19 623 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF675Q8TD23 568 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 GGHQ92820 318 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 ELSPBP1Q96BH3 223 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 RIPOR3Q96MK2 946 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 AMBNQ9NP70 447 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 PCDHGA3Q9Y5H0 932 aa16.28■□□□□ 0.2
FOXA1-201ENST00000250448 COX7A2P14406 83 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 VIPR1P32241 457 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 NR4A2P43354 598 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 KCNJ10P78508 379 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 UBE2R2Q712K3 238 aaPredicted RBP16.27■□□□□ 0.2
FOXA1-201ENST00000250448 HEATR4Q86WZ0 1026 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 FCRL1Q96LA6 429 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 FAM129BQ96TA1 746 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 TMEM245Q9H330 911 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 RUBCNLQ9H714 662 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 FAM120CQ9NX05 1096 aaKnown RBP16.27■□□□□ 0.2
FOXA1-201ENST00000250448 FAM8A1Q9UBU6 413 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 VPS4AQ9UN37 437 aa16.27■□□□□ 0.2
FOXA1-201ENST00000250448 CLCA1A8K7I4 914 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 B4GALNT1Q00973 533 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 CLPPQ16740 277 aaPredicted RBP16.27■□□□□ 0.19
FOXA1-201ENST00000250448 GPR33Q49SQ1 333 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 FAM124AQ86V42 546 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 CCDC103Q8IW40 242 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 TCAIMQ8N3R3 496 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 Q8N9G6 341 aaPredicted RBP16.27■□□□□ 0.19
FOXA1-201ENST00000250448 CAPSLQ8WWF8 208 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 SUSD6Q92537 303 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 OR51E2Q9H255 320 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 RNF167Q9H6Y7 350 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 SPASTQ9UBP0 616 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 PCDHGB3Q9Y5G1 929 aa16.27■□□□□ 0.19
FOXA1-201ENST00000250448 FAM47E-STBD1D6RA91 191 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 PRMT3O60678 531 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 MED26O95402 600 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 ADORA3P0DMS8 318 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 SLC6A12P48065 614 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 IFITM2Q01629 132 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 FBXO43Q4G163 708 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 SOWAHCQ53LP3 525 aaPredicted RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 FRG2Q64ET8 278 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 PEX5LQ8IYB4 626 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 RNF175Q8N4F7 328 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CHAC2Q8WUX2 184 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 ZNF486Q96H40 463 aaPredicted RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 MSLNLQ96KJ4 702 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 FRG2BQ96QU4 278 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 RIOK2Q9BVS4 552 aaKnown RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 RAPGEFL1Q9UHV5 662 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 EDDM13A0A1B0GTR0 161 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 SPINT1O43278 529 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 SUV39H1O43463 412 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 NUDT7P0C024 238 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 TCEA1P23193 301 aaKnown RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 PXNP49023 591 aaPredicted RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 NUDT6P53370 316 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CRYBA2P53672 197 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 PTCHD3Q3KNS1 767 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 THOC7Q6I9Y2 204 aaKnown RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CCBE1Q6UXH8 406 aaPredicted RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CBARPQ8N350 705 aaPredicted RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CLIP4Q8N3C7 705 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CDC26Q8NHZ8 85 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 OR8D1Q8WZ84 308 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 TPT1P8Q9HAU6 139 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 RAD18Q9NS91 495 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 ADPRHL2Q9NX46 363 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 CAB39Q9Y376 341 aaPredicted RBP16.26■□□□□ 0.19
FOXA1-201ENST00000250448 PCDHB11Q9Y5F2 797 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 PEX16Q9Y5Y5 336 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 PLXNB3Q9ULL4 1909 aa16.26■□□□□ 0.19
FOXA1-201ENST00000250448 KIAA1549LQ6ZVL6 1849 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 PRAMEF4O60810 478 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 CYP2A6P11509 494 aaPredicted RBP16.25■□□□□ 0.19
FOXA1-201ENST00000250448 AOAHP28039 575 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 KRR1Q13601 381 aaKnown RBP16.25■□□□□ 0.19
FOXA1-201ENST00000250448 EIF4HQ15056 248 aaKnown RBP16.25■□□□□ 0.19
FOXA1-201ENST00000250448 PRAMEF9Q5VWM5 478 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 ATL1Q8WXF7 558 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 COL21A1Q96P44 957 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 C19orf43Q9BQ61 176 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 GPR83Q9NYM4 423 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 PADI2Q9Y2J8 665 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 PCDHGB6Q9Y5F9 930 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 TICRRQ7Z2Z1 1910 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 MUC22E2RYF6 1773 aaPredicted RBP16.25■□□□□ 0.19
FOXA1-201ENST00000250448 MYO10Q9HD67 2058 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 STSP08842 583 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms