RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PRDM9Q9NQV7 894 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 PPT2Q9UMR5 302 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 DAPP1Q9UN19 280 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 RNF11Q9Y3C5 154 aa22.91■■□□□ 1.26
SDF2L1-201ENST00000248958 KALRNO60229 2985 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 SMIM23A6NLE4 172 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 FOXE1O00358 373 aaPredicted RBP22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 CLDN4O14493 209 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 PRR35P0CG20 571 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 PTX3P26022 381 aaPredicted RBP22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 ACTN3Q08043 901 aaPredicted RBP22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 DDX39BQ13838 428 aaKnown RBP22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 ZRSR2Q15696 482 aaKnown RBP22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 AP5B1Q2VPB7 878 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 SH2D5Q6ZV89 423 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 MILR1Q7Z6M3 343 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 ZADH2Q8N4Q0 377 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 OR52B6Q8NGF0 335 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 RGMAQ96B86 450 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 CCDC126Q96EE4 140 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 PTCHD1Q96NR3 888 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 LPAR4Q99677 370 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 PARD6BQ9BYG5 372 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 LYRM4Q9HD34 91 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 SEMA4BQ9NPR2 832 aaPredicted RBP22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 GRID1Q9ULK0 1009 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 SPACA6W5XKT8 324 aa22.9■■□□□ 1.26
SDF2L1-201ENST00000248958 TLN1Q9Y490 2541 aaKnown RBP22.89■■□□□ 1.26
SDF2L1-201ENST00000248958 DLX3O60479 287 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 SCELO95171 688 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 IMPDH1P20839 514 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 RAP1GDS1P52306 607 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 IFFO1Q0D2I5 559 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 TRAF3Q13114 568 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 CUL3Q13618 768 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 EXT1Q16394 746 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 CCDC153Q494R4 210 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 CRB2Q5IJ48 1285 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 PLAG1Q6DJT9 500 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 IGFL2Q6UWQ7 119 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 ISLR2Q6UXK2 745 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 ZNF595Q8IYB9 648 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 CYP4X1Q8N118 509 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 C7orf57Q8NEG2 295 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 MYRIPQ8NFW9 859 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 WDR20Q8TBZ3 569 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 NSUN5Q96P11 429 aaKnown RBP22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 LMF1Q96S06 567 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 MTERF1Q99551 399 aaKnown RBP22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 EPS8L2Q9H6S3 715 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 STK38LQ9Y2H1 464 aa22.89■■□□□ 1.25
SDF2L1-201ENST00000248958 BLACEA4D250 179 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 OR2W5A6NFC9 320 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 SEC24DO94855 1032 aaPredicted RBP22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 ATP5A1P25705 553 aaKnown RBP22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 CERS1P27544 350 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 CRHR1P34998 444 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 PRKAA2P54646 552 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 LIM2P55344 173 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 HSD17B7P56937 341 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 OR4D2P58180 307 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 NAA20P61599 178 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 CLCQ05315 142 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 SFT2D3Q587I9 215 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 ZNF678Q5SXM1 525 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 TTC19Q6DKK2 380 aaPredicted RBP22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 UBE3DQ7Z6J8 389 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 MREGQ8N565 214 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 TSLPQ969D9 159 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 PNPLA2Q96AD5 504 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 CDK15Q96Q40 435 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 OR51B5Q9H339 312 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 PRTFDC1Q9NRG1 225 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 RAB21Q9UL25 225 aa22.88■■□□□ 1.25
SDF2L1-201ENST00000248958 TLDC2A0PJX2 215 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 SUPT7LO94864 414 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 HIST1H1TP22492 207 aaPredicted RBP22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 SSR2P43308 183 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 RPS13P62277 151 aaKnown RBP22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 BTG2P78543 158 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 FRG2Q64ET8 278 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 OR4C11Q6IEV9 310 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 PAPD4Q6PIY7 484 aaKnown RBP22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 RBMXL3Q8N7X1 1067 aaKnown RBP22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 ACOT4Q8N9L9 421 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 OR4F6Q8NGB9 312 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 M1APQ8TC57 530 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 L3HYPDHQ96EM0 354 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 FRG2BQ96QU4 278 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 WDR77Q9BQA1 342 aaPredicted RBP22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 TRPS1Q9UHF7 1281 aa22.87■■□□□ 1.25
SDF2L1-201ENST00000248958 IGKV3D-11A0A0A0MRZ8 115 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 IGHV3-20A0A0C4DH32 117 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 TCRBV16S1A1N1A0A5B0 115 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 FAM227AF5H4B4 570 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 J3QKU1 62 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 COPEO14579 308 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 MLYCDO95822 493 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 CDH13P55290 713 aa22.86■■□□□ 1.25
SDF2L1-201ENST00000248958 SLC18A2Q05940 514 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms