RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 REPS1Q96D71 796 aa13.32□□□□□ -0.28
EGR1-201ENST00000239938 FAM193BQ96PV7 902 aaPredicted RBP13.32□□□□□ -0.28
EGR1-201ENST00000239938 SLA2Q9H6Q3 261 aa13.32□□□□□ -0.28
EGR1-201ENST00000239938 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
EGR1-201ENST00000239938 ZNF670-ZNF695F2Z2N8 137 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 LRRTM2O43300 516 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 ANXA4P09525 319 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 HIST1H2AGP0C0S8 130 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 MSL3P1P0C860 447 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 HIST1H2ADP20671 130 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 RHAGQ02094 409 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 ASAH1Q13510 395 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SCARB2Q14108 478 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 VEPH1Q14D04 833 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 LARS2Q15031 903 aaKnown RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 TRIM60Q495X7 471 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 CEP78Q5JTW2 689 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 PAMR1Q6UXH9 720 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SLC24A5Q71RS6 500 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 ABI3BPQ7Z7G0 1075 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 JPH3Q8WXH2 748 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 HIST1H2AHQ96KK5 128 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 PIP5K1AQ99755 562 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 HIST1H2AJQ99878 128 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 H2AFJQ9BTM1 129 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 NMNAT1Q9HAN9 279 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 C11orf16Q9NQ32 467 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 C1GALT1Q9NS00 363 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SH3BP4Q9P0V3 963 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 DSPPQ9NZW4 1301 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 MTX2O75431 263 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 EOMESO95936 686 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 ASGR1P07306 291 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 C8GP07360 202 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 TRAPPC2P0DI81 140 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 TRAPPC2BP0DI82 140 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 ITGB7P26010 798 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SSTR4P31391 388 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 GNG2P59768 71 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SNRPD2P62316 118 aaKnown RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 BCL2L1Q07817 233 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 PRSS53Q2L4Q9 553 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 MPEG1Q2M385 716 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 CAMKMTQ7Z624 323 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 GLCCI1Q86VQ1 547 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 CBARPQ8N350 705 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 GPR156Q8NFN8 814 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 CIDECQ96AQ7 238 aaPredicted RBP13.31□□□□□ -0.28
EGR1-201ENST00000239938 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 ZNF556Q9HAH1 456 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 DNAJC27Q9NZQ0 273 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 CMAHPQ9Y471 501 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 SNX11Q9Y5W9 270 aa13.31□□□□□ -0.28
EGR1-201ENST00000239938 TPST2O60704 377 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 SEMA7AO75326 666 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 GBAP04062 536 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 ALPPP05187 535 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 PIPP12273 146 aaPredicted RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 POLR2EP19388 210 aaKnown RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 CTGFP29279 349 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 WEE1P30291 646 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 PTSQ03393 145 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 PCDH1Q08174 1060 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 SPHARQ15513 63 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 SLC35F1Q5T1Q4 408 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 SLC38A6Q8IZM9 456 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 SLC34A3Q8N130 599 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 REV1Q9UBZ9 1251 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 PLEKHB1Q9UF11 243 aaPredicted RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 NINQ8N4C6 2090 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 TRBV4-1A0A0J9YWV2 114 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 ZSCAN5BA6NJL1 495 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 CPNE3O75131 537 aaKnown RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 GADD45GO95257 159 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 RPL17P18621 184 aaKnown RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 LHCGRP22888 699 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 PTX3P26022 381 aaPredicted RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 LIM2P55344 173 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 NKX3-2P78367 333 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 MC1RQ01726 317 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 EFR3AQ14156 821 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 DUSP7Q16829 419 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 CCSMST1Q4G0I0 132 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 LIPJQ5W064 366 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 OR5AK3PQ8NH89 298 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 HCAR2Q8TDS4 363 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 CREB3L4Q8TEY5 395 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 VPS35Q96QK1 796 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 MAPKAP1Q9BPZ7 522 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 KLF16Q9BXK1 252 aaPredicted RBP13.3□□□□□ -0.28
EGR1-201ENST00000239938 MCOLN1Q9GZU1 580 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 NDUFB11Q9NX14 153 aa13.3□□□□□ -0.28
EGR1-201ENST00000239938 COQ3Q9NZJ6 369 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms