RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RETSATQ6NUM9 610 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 SLC34A3Q8N130 599 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 OR52N2Q8NGI0 321 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 METTL2AQ96IZ6 378 aaKnown RBP14.85□□□□□ -0.03
DDX55-201ENST00000238146 LYSMD1Q96S90 227 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 SLC35A5Q9BS91 424 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 SGK2Q9HBY8 427 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 FZD3Q9NPG1 666 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 SEC14L4Q9UDX3 406 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 STOML2Q9UJZ1 356 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 CMAHPQ9Y471 501 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 ENPP4Q9Y6X5 453 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 GNG14A0A1W2PPG7 69 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 FAM227AF5H4B4 570 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 ZNF821O75541 412 aaPredicted RBP14.85□□□□□ -0.03
DDX55-201ENST00000238146 YES1P07947 543 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 EEF1A2Q05639 463 aaKnown RBP14.85□□□□□ -0.03
DDX55-201ENST00000238146 RUNX1T1Q06455 604 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 ASAH1Q13510 395 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 LARS2Q15031 903 aaKnown RBP14.85□□□□□ -0.03
DDX55-201ENST00000238146 GLYR1Q49A26 553 aaPredicted RBP14.85□□□□□ -0.03
DDX55-201ENST00000238146 ZNF770Q6IQ21 691 aaPredicted RBP14.85□□□□□ -0.03
DDX55-201ENST00000238146 TPRG1Q6ZUI0 275 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 HJURPQ8NCD3 748 aaPredicted RBP14.85□□□□□ -0.03
DDX55-201ENST00000238146 SLC22A4Q9H015 551 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 ACSL6Q9UKU0 697 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 STUB1Q9UNE7 303 aa14.85□□□□□ -0.03
DDX55-201ENST00000238146 IQCMA0A1B0GVH7 501 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 H7C4K7 107 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 C6orf47O95873 294 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 HBQ1P09105 142 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 CKBP12277 381 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 HSD3B1P14060 373 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 RPL17P18621 184 aaKnown RBP14.84□□□□□ -0.03
DDX55-201ENST00000238146 ITGB7P26010 798 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 HSD3B2P26439 372 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 GNG2P59768 71 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 CDK6Q00534 326 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 LEXMQ3ZCV2 418 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 CRB2Q5IJ48 1285 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 PLEKHS1Q5SXH7 462 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 CACTIN-AS1Q8N1I8 211 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 FAM181AQ8N9Y4 354 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 FBXO22Q8NEZ5 403 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 GOT1L1Q8NHS2 421 aaPredicted RBP14.84□□□□□ -0.03
DDX55-201ENST00000238146 RASSF5Q8WWW0 418 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 C2orf49Q9BVC5 232 aaPredicted RBP14.84□□□□□ -0.03
DDX55-201ENST00000238146 BEX2Q9BXY8 128 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 C11orf54Q9H0W9 315 aaPredicted RBP14.84□□□□□ -0.03
DDX55-201ENST00000238146 TMEM38AQ9H6F2 299 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 BRF2Q9HAW0 419 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 C11orf16Q9NQ32 467 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 SNX7Q9UNH6 387 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 PLXNB3Q9ULL4 1909 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 CCDC182A6NF36 153 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 FADS2P1A8MWK0 482 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 RECKO95980 971 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 SRCP12931 536 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 LHCGRP22888 699 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 FEN1P39748 380 aaKnown RBP14.84□□□□□ -0.03
DDX55-201ENST00000238146 MAPK8P45983 427 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 MXD1Q05195 221 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 FCHO2Q0JRZ9 810 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 GRHL2Q6ISB3 625 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 C17orf99Q6UX52 265 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 FAM131AQ6UXB0 335 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 CCDC149Q6ZUS6 474 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 RDH10Q8IZV5 341 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 VOPP1Q96AW1 172 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 DHRS1Q96LJ7 313 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 PRM3Q9NNZ6 103 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 ABCB9Q9NP78 766 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 DNAJC27Q9NZQ0 273 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 MAPRE3Q9UPY8 281 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 TMA7Q9Y2S6 64 aaKnown RBP14.84□□□□□ -0.03
DDX55-201ENST00000238146 DSPPQ9NZW4 1301 aa14.84□□□□□ -0.03
DDX55-201ENST00000238146 A0A0B4J293 547 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 HYKKA2RU49 373 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 B4DXG7 233 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 TLR4O00206 839 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 MTX2O75431 263 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 CSF3P09919 207 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 ZNF8P17098 575 aaPredicted RBP14.83□□□□□ -0.03
DDX55-201ENST00000238146 RHCEP18577 417 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 SERPINA4P29622 427 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 TIA1P31483 386 aaKnown RBP eCLIP14.83□□□□□ -0.03
DDX55-201ENST00000238146 CSNK1DP48730 415 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 SMAD3P84022 425 aaKnown RBP14.83□□□□□ -0.03
DDX55-201ENST00000238146 FAM209AQ5JX71 171 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 TRAF7Q6Q0C0 670 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 OR7G3Q8NG95 312 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 HUS1BQ8NHY5 278 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 KLHL6Q8WZ60 621 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 RNF31Q96EP0 1072 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 SCRN2Q96FV2 425 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 TMEM80Q96HE8 168 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 OR4K3Q96R72 315 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 TMEM121BQ9BXQ6 578 aaPredicted RBP14.83□□□□□ -0.03
DDX55-201ENST00000238146 BHLHE41Q9C0J9 482 aaPredicted RBP14.83□□□□□ -0.03
DDX55-201ENST00000238146 MIXL1Q9H2W2 232 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms