RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 NKX2-5P52952 324 aaPredicted RBP7.93□□□□□ -1.14
APOB-201ENST00000233242 MC1RQ01726 317 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 DUSP4Q13115 394 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 AGAP7PQ5VUJ5 663 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ELP5Q8TE02 316 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 COPS5Q92905 334 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CORO1BQ9BR76 489 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 TLE2Q04725 743 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 RCAN2Q14206 197 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CNTNAP3BQ96NU0 1288 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 GSKIPQ9P0R6 139 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 NDUFS1P28331 727 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CRISP1P54107 249 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ABRAXAS2Q15018 415 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 OR52E4Q8NGH9 312 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SLC7A13Q8TCU3 470 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 RIPOR3Q96MK2 946 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 RIOK2Q9BVS4 552 aaKnown RBP7.93□□□□□ -1.14
APOB-201ENST00000233242 GXYLT2A0PJZ3 443 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 RGS6P49758 472 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 FTMTQ8N4E7 242 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 C1orf52Q8N6N3 182 aaKnown RBP7.93□□□□□ -1.14
APOB-201ENST00000233242 SCGB1C1Q8TD33 95 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 MRPS30Q9NP92 439 aaKnown RBP7.93□□□□□ -1.14
APOB-201ENST00000233242 PCDHB11Q9Y5F2 797 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SLC22A31A6NKX4 558 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CERS1P27544 350 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CA5AP35218 305 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CEACAM19Q7Z692 300 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 GPC2Q8N158 579 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 PQLC3Q8N755 202 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 PCED1BQ96HM7 432 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CFAP97Q9P2B7 532 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 LIPT1Q9Y234 373 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 PCDHB14Q9Y5E9 798 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ENPP2Q13822 863 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 FAM69AQ5T7M9 428 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 BRAT1Q6PJG6 821 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 TERB2Q8NHR7 220 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 MTFR1LQ9H019 292 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 PSAT1Q9Y617 370 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 RAB19A4D1S5 217 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 T-ENOLP0DO92 83 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ETV6P41212 452 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 NAPRTQ6XQN6 538 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 RNF130Q86XS8 419 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ZNF101Q8IZC7 436 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 NRG4Q8WWG1 115 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 HEBP1Q9NRV9 189 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.93□□□□□ -1.14
APOB-201ENST00000233242 ZNF878C9JN71 531 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 IFNA5P01569 189 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 OR1J4Q8NGS1 313 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CDC6Q99741 560 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 MEPEQ9NQ76 525 aaPredicted RBP7.93□□□□□ -1.14
APOB-201ENST00000233242 NLKQ9UBE8 527 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SLC27A5Q9Y2P5 690 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 F8W036 122 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 POLR1CO15160 346 aaPredicted RBP7.93□□□□□ -1.14
APOB-201ENST00000233242 BLOC1S1P78537 153 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ARL6IP1Q15041 203 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 UBXN11Q5T124 520 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 C22orf42Q6IC83 251 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ABHD13Q7L211 337 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 OR7D4Q8NG98 312 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 BRWD1Q9NSI6 2320 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 BCHEP06276 602 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 HK3P52790 923 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 PPIGQ13427 754 aaKnown RBP eCLIP7.93□□□□□ -1.141e-323■□□□□ 8.2
APOB-201ENST00000233242 CCDC58Q4VC31 144 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SACM1LQ9NTJ5 587 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 PCDHGC4Q9Y5F7 938 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 A3GALT2U3KPV4 340 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SLC16A5O15375 505 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ITGAMP11215 1152 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 MAOAP21397 527 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 S1PR1P21453 382 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 ACBD7Q8N6N7 88 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SNAPC3Q92966 411 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 TSGA13Q96PP4 275 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 CDK15Q96Q40 435 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SMOC2Q9H3U7 446 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 SDR39U1Q9NRG7 319 aaPredicted RBP7.93□□□□□ -1.14
APOB-201ENST00000233242 GFOD1Q9NXC2 390 aa7.93□□□□□ -1.14
APOB-201ENST00000233242 IGKV6D-41A0A0C4DH26 115 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SULT1B1O43704 296 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PRAMEF2O60811 474 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 TFP02787 698 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CSN2P05814 226 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CDK2P24941 298 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 RAB5CP51148 216 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 ATXN7L3Q14CW9 347 aaPredicted RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 SIRPB2Q5JXA9 342 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 TMEM220Q6QAJ8 160 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 GLIS1Q8NBF1 620 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 MANSC4A6NHS7 340 aaPredicted RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 GRIN3BO60391 1043 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SOX14O95416 240 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PDYNP01213 254 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms