RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 IDH2P48735 452 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 EVX1P49640 407 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 CDKN2DP55273 166 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 ERVK-25P63136 954 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 IL18Q14116 193 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 HIST2H2AA3Q6FI13 130 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 LIX1Q8N485 282 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 OR52K2Q8NGK3 314 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 AP3S1Q92572 193 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 HIST1H2AHQ96KK5 128 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 PRMT6Q96LA8 375 aaPredicted RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 HIST1H2AJQ99878 128 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 REEP1Q9H902 201 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 GKN1Q9NS71 199 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 MPP6Q9NZW5 540 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 MYEF2Q9P2K5 600 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 MYLKQ15746 1914 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 TEX46H3BTG2 121 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 SCAMP1O15126 338 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 ZNF682O95780 498 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 PRDX3P30048 256 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 NUBP1P53384 320 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 DGKZQ13574 1117 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 PUM1Q14671 1186 aaKnown RBP eCLIP12.5□□□□□ -0.41
MSH2-201ENST00000233146 TCTE1Q5JU00 501 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 FAM180BQ6P0A1 224 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 WASH2PQ6VEQ5 465 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 Q6ZSR9 355 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 ELP5Q8TE02 316 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 C11orf24Q96F05 449 aaPredicted RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 ZDHHC12Q96GR4 267 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 B3GNT5Q9BYG0 378 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 ZNF225Q9UK10 706 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 SIGLEC5O15389 551 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 KDM4BO94953 1096 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 POP4O95707 220 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 ODC1P11926 461 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 STAT5BP51692 787 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 SIGLEC14Q08ET2 396 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 OR4D1Q15615 310 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 KIAA0930Q6ICG6 404 aaPredicted RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 KRT78Q8N1N4 520 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 GPR156Q8NFN8 814 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 SCARB1Q8WTV0 552 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 DMRTA2Q96SC8 542 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 CMSS1Q9BQ75 279 aaKnown RBP12.5□□□□□ -0.41
MSH2-201ENST00000233146 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 ABHD16BQ9H3Z7 469 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 ANKRD19PQ9H560 264 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 SEC14L3Q9UDX4 400 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 RPS6KA6Q9UK32 745 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 PCDHGA2Q9Y5H1 932 aa12.5□□□□□ -0.41
MSH2-201ENST00000233146 TRBV5-3A0A0A0MS03 114 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ARGFXA6NJG6 315 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 LACTBL1A8MY62 500 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 DCLK1O15075 740 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 SLC7A4O43246 635 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ESR1P03372 595 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 FBP1P09467 338 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 TRAM2Q15035 370 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 CHRNA6Q15825 494 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ANKS6Q68DC2 871 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 OR1S1Q8NH92 325 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ZIC5Q96T25 663 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 COMMD3Q9UBI1 195 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 SLC45A1Q9Y2W3 748 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 BTCP35070 178 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ITGA1P56199 1179 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 TAF1AQ15573 450 aaPredicted RBP12.49□□□□□ -0.41
MSH2-201ENST00000233146 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.49□□□□□ -0.41
MSH2-201ENST00000233146 HECTD3Q5T447 861 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 KLHDC8BQ8IXV7 354 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 FAM120BQ96EK7 910 aaKnown RBP12.49□□□□□ -0.41
MSH2-201ENST00000233146 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 PDCD10Q9BUL8 212 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 KATNB1Q9BVA0 655 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 STRCQ7RTU9 1775 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 DOCK5Q9H7D0 1870 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ANXA2P2A6NMY6 339 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ADAM12O43184 909 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 CSO75390 466 aaKnown RBP12.49□□□□□ -0.41
MSH2-201ENST00000233146 CCNB2O95067 398 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 CCNDBP1O95273 360 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 SPP1P10451 314 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ENGP17813 658 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 GPX4P36969 197 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms