RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 A0A1W2PPM1 405 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 GOLGA8RI6L899 631 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 DLX3O60479 287 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 PCNAP12004 261 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 IMPDH1P20839 514 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 HIST1H1TP22492 207 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ITGA3P26006 1051 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 PLA2G16P53816 162 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 HSD17B7P56937 341 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 OLR1P78380 273 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 Q0VFX4 171 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 NSDHLQ15738 373 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 EXT1Q16394 746 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ZNF678Q5SXM1 525 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 MFSD4BQ5TF39 518 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 AGAP7PQ5VUJ5 663 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 UBE3DQ7Z6J8 389 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ANKRD37Q7Z713 158 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ZNF605Q86T29 641 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 MYLK4Q86YV6 388 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-201ENST00000199706 SCUBE1Q8IWY4 988 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ZNF595Q8IYB9 648 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 CYP4X1Q8N118 509 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ZCCHC7Q8N3Z6 543 aaKnown RBP16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ARMC2Q8NEN0 867 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 ATP6V1E2Q96A05 226 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 AGAP4Q96P64 663 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 F2RL3Q96RI0 385 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 WDR77Q9BQA1 342 aaPredicted RBP16.38■□□□□ 0.21
MRPL28-201ENST00000199706 MESP1Q9BRJ9 268 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 TRPS1Q9UHF7 1281 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 EMCNQ9ULC0 261 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 RNF11Q9Y3C5 154 aa16.38■□□□□ 0.21
MRPL28-201ENST00000199706 TCRBV16S1A1N1A0A5B0 115 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 A6NL46 340 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 H3BQF6 201 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 CDK2AP1O14519 115 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 PRMT3O60678 531 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 MLYCDO95822 493 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 B3GALT4O96024 378 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 PROCP04070 461 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 PRR35P0CG20 571 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 ATP5A1P25705 553 aaKnown RBP16.37■□□□□ 0.21
MRPL28-201ENST00000199706 SOX11P35716 441 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 LIM2P55344 173 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 EEF1A2Q05639 463 aaKnown RBP16.37■□□□□ 0.21
MRPL28-201ENST00000199706 ZNF33BQ06732 778 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 RUNX2Q13950 521 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 ZRSR2Q15696 482 aaKnown RBP16.37■□□□□ 0.21
MRPL28-201ENST00000199706 CPSF6Q16630 551 aaKnown RBP eCLIP16.37■□□□□ 0.21
MRPL28-201ENST00000199706 CRB2Q5IJ48 1285 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 FRG2Q64ET8 278 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 ZYG11AQ6WRX3 759 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 TEX19Q8NA77 164 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 RGMAQ96B86 450 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 NSUN5Q96P11 429 aaKnown RBP16.37■□□□□ 0.21
MRPL28-201ENST00000199706 TMEM237Q96Q45 408 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 FRG2BQ96QU4 278 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 LMF1Q96S06 567 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 SERPINI1Q99574 410 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 LPAR4Q99677 370 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 MS4A12Q9NXJ0 267 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.37■□□□□ 0.21
MRPL28-201ENST00000199706 MID2Q9UJV3 735 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 V9GYY5 206 aaPredicted RBP16.37■□□□□ 0.21
MRPL28-201ENST00000199706 SPACA6W5XKT8 324 aa16.37■□□□□ 0.21
MRPL28-201ENST00000199706 UBR5O95071 2799 aaPredicted RBP16.36■□□□□ 0.21
MRPL28-201ENST00000199706 CYR61O00622 381 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 CLDN4O14493 209 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 PLIN3O60664 434 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 DNAJB6O75190 326 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 KRT4P19013 534 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 NR1D1P20393 614 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 CERS1P27544 350 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 DNAJB13P59910 316 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 CLCQ05315 142 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 IFFO1Q0D2I5 559 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 LCP2Q13094 533 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 AP5B1Q2VPB7 878 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 ISLR2Q6UXK2 745 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 ZNF793Q6ZN11 406 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 LANCL3Q6ZV70 420 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 TRABD2AQ86V40 505 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 ACOT4Q8N9L9 421 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 M1APQ8TC57 530 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 PPP4R1Q8TF05 950 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 PSMF1Q92530 271 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 PNPLA2Q96AD5 504 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 THOC3Q96J01 351 aaKnown RBP16.36■□□□□ 0.21
MRPL28-201ENST00000199706 MTERF1Q99551 399 aaKnown RBP16.36■□□□□ 0.21
MRPL28-201ENST00000199706 RBCK1Q9BYM8 510 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 SLC29A3Q9BZD2 475 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 RNF32Q9H0A6 362 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 BRF2Q9HAW0 419 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 MMP25Q9NPA2 562 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 SEMA4BQ9NPR2 832 aaPredicted RBP16.36■□□□□ 0.21
MRPL28-201ENST00000199706 KCMF1Q9P0J7 381 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 NBASA2RRP1 2371 aa16.36■□□□□ 0.21
MRPL28-201ENST00000199706 RP1L1Q8IWN7 2480 aaPredicted RBP16.35■□□□□ 0.21
MRPL28-201ENST00000199706 SMIM23A6NLE4 172 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms