RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GPR142Q7Z601 462 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PDSS2Q86YH6 399 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 NEIL3Q8TAT5 605 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 NAA11Q9BSU3 229 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CACNA1EQ15878 2313 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CLIC1O00299 241 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 DENRO43583 198 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 RETP07949 1114 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 NUDT7P0C024 238 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 BCKDHAP12694 445 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 HNRNPLP14866 589 aaKnown RBP eCLIP5.88□□□□□ -1.472e-6■■■■□ 22.1
VPS13D-201ENST00000011700 RAC2P15153 192 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 UQCRC2P22695 453 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 NKX3-2P78367 333 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 NKX6-1P78426 367 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OR7G2Q8NG99 324 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OR4K2Q8NGD2 314 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 KCNJ9Q92806 393 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SDCBP2Q9H190 292 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 HIPK2Q9H2X6 1198 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 C11orf49Q9H6J7 331 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CHST7Q9NS84 486 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SERTAD3Q9UJW9 196 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SCML1Q9UN30 329 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PXDNQ92626 1479 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TEX51A0A1B0GUA7 166 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TLR4O00206 839 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FHP07954 510 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TPT1P13693 172 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 RNF19BQ6ZMZ0 732 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ERMP1Q7Z2K6 904 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TIPARPQ7Z3E1 657 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 LIX1Q8N485 282 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FITM2Q8N6M3 262 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 RNF148Q8N7C7 305 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 LFNGQ8NES3 379 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OR10A6Q8NH74 314 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PHYHIPQ92561 330 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CORO2AQ92828 525 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 DAZLQ92904 295 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SPTSSAQ969W0 71 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 IL12RB2Q99665 862 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 DUSP9Q99956 384 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OPA3Q9H6K4 179 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 IMP3Q9NV31 184 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ZDHHC3Q9NYG2 299 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ABRACLQ9P1F3 81 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PCDHB3Q9Y5E6 796 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 UBIAD1Q9Y5Z9 338 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 AGAP14A8MT82 685 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 GPR37L1O60883 481 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ITPK1Q13572 414 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PAOXQ6QHF9 649 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 KCTD20Q7Z5Y7 419 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 GKN2Q86XP6 184 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OR14A2Q96R54 314 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 HECAQ9UBI9 543 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SLC6A14Q9UN76 642 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 COL3A1P02461 1466 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 MOXD2PA6NHM9 499 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TGOLN2O43493 480 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 DRD2P14416 443 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PPT1P50897 306 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CMIPQ8IY22 773 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SIX5Q8N196 739 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 YIPF7Q8N8F6 280 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OR10G2Q8NGC3 310 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 OR6T1Q8NGN1 323 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PHOX2BQ99453 314 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CPVLQ9H3G5 476 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 APMAPQ9HDC9 416 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 FAM105AQ9NUU6 356 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 KCNIP1Q9NZI2 227 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 MAP4K5Q9Y4K4 846 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 PDCD11Q14690 1871 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 HCKP08631 526 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CD79BP40259 229 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 GTF3C1Q12789 2109 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CHIT1Q13231 466 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 AKR1C8PQ5T2L2 129 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 CELF6Q96J87 481 aaKnown RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SEMA4CQ9C0C4 833 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 SLC25A31Q9H0C2 315 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 TPT1P8Q9HAU6 139 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-201ENST00000011700 Q9Y3F1 56 aa5.88□□□□□ -1.47
VPS13D-201ENST00000011700 EI24O14681 340 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 LRCH4O75427 683 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 CD3GP09693 182 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 ALPIP09923 528 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 MC3RP41968 323 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 CDH12P55289 794 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF529Q6P280 563 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 KLHDC10Q6PID8 442 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 PRSS48Q7RTY5 328 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 APOLD1Q96LR9 279 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 CGREF1Q99674 301 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 DNTTIP1Q9H147 329 aa5.87□□□□□ -1.47
VPS13D-201ENST00000011700 C2orf72A6NCS6 295 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms