RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tceal7A3KGA4 98 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Glp1rO35659 463 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Galr2O88854 371 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lamp2P17047 415 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Esr1P19785 599 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tmem221Q8K071 230 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dlgap5Q8K4R9 808 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gfod2Q9CYH5 385 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Chp2Q9D869 196 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 NplQ9DCJ9 320 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sh3bgrlQ9JJU8 114 aaKnown RBP11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fam43bA2AM80 330 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r15L7N2A0 855 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Nsg2P47759 171 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rfx3P48381 749 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 BB287469Q3UT53 144 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tfap2bQ61313 459 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Xpnpep1Q6P1B1 623 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 TtpaQ8BWP5 278 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ctrb1Q9CR35 263 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Atp13a2Q9CTG6 1169 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slc30a7Q9JKN1 378 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Arl6ip1Q9JKW0 203 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 AtrnQ9WU60 1428 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm5724L7N264 670 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm6614M0QWR8 670 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dpy19l2P0CW70 773 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rab8aP55258 207 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dusp2Q05922 318 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zc3h12aQ5D1E7 596 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 IppkQ6P1C1 489 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 ErfeQ6PGN1 340 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Serpina12Q7TMF5 413 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zc3hav1lQ8BFR1 296 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr134Q8VG95 312 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cd209eQ91ZW7 208 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Marc2Q922Q1 338 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 RbmxQ9WV02 391 aaKnown RBP11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Mia3Q8BI84 1930 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp981A2A8V7 445 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rab5bP61021 215 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Six5P70178 719 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lrrc74bQ14BP6 391 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 MuskQ61006 868 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Adhfe1Q8R0N6 465 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cmtm3Q99LJ5 184 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 PgcQ9D7R7 392 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 B3galt5Q9JI67 308 aa11.57□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr519K7N645 319 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 F2P19221 618 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 DmpkP54265 631 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lingo4Q149C3 593 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Arl14Q3SXC5 192 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 ClpbQ60649 677 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Creb3l2Q8BH52 521 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Smyd4Q8BTK5 799 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Nipal4Q8BZF2 406 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lrrn3Q8CBC6 707 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rnf130Q8VEM1 419 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr821Q8VG45 310 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr61Q8VGM2 311 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slc5a2Q923I7 670 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cngb3Q9JJZ9 694 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Elovl2Q9JLJ4 292 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Kcnq2Q9Z351 759 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Col16a1Q8BLX7 1580 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm12394A2AKP6 982 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp81B8JJZ7 531 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Itga10E9Q6R1 1167 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Il20rbE9Q9A6 308 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gstm1P10649 218 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Il2rbP16297 539 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Id2P41136 134 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Oaz1P54369 227 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 B3gat2P59270 324 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rab2bP59279 216 aaKnown RBP11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Yes1Q04736 541 aaKnown RBP11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr616Q3KPB0 317 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 1700057G04RikQ3V0U0 232 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 CochQ62507 552 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp595Q8BIN6 625 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 PdhxQ8BKZ9 501 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Flrt2Q8BLU0 660 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 NarsQ8BP47 559 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ptbp2Q91Z31 531 aaKnown RBP11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Abcb8Q9CXJ4 717 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Armc10Q9D0L7 306 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Mgat4dQ9D4R2 373 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ms4a4bQ9ES61 226 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1511E9PWU0 318 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1510E9PZZ6 318 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 ChadlE9Q7T7 748 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm21800J3QMJ9 180 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1121L7MTT1 314 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 CtssO70370 340 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fosl1P48755 273 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Larp4Q8BWW4 719 aaKnown RBP11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Kdelr3Q8R1L4 214 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 4933421I07RikQ9D420 214 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Stk19Q9JHN8 254 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms