RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Otud4B2RRE7 1107 aaKnown RBP11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Bnip2O54940 326 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Btnl2O70355 454 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Kcnc1P15388 511 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Kcnc2Q14B80 642 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Xrcc1Q60596 631 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Zc4h2Q68FG0 224 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pex26Q8BGI5 305 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Plekhm3Q8BM47 761 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 ReltQ8BX43 436 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mri1Q9CQT1 369 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Jph1Q9ET80 660 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Hao2Q9NYQ2 353 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 GghQ9Z0L8 317 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Zscan4eA0A1B0GRE8 505 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Vmn2r18E9Q280 788 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 FaimlJ3QPY3 178 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Kcnj13P86046 360 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Acsm3Q3UNX5 580 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cntn4Q69Z26 1026 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ces2bQ6PDB7 556 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tas2r104Q7M723 302 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 AasdhQ80WC9 1100 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Txndc11Q8K2W3 948 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Bcl7aQ9CXE2 210 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Jph3Q9ET77 744 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tubd1Q9R1K7 455 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mfsd4b4J3QNS5 503 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rps15aP62245 130 aaKnown RBP11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Smim24Q0VG18 120 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Fbxw18Q3TSA9 469 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Efr3aQ8BG67 819 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tmed11Q9D2R4 215 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Slc7a7Q9Z1K8 510 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 IqccA2ADZ8 418 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm20695H3BLK7 282 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ido1P28776 407 aaKnown RBP11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gspt2Q149F3 632 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 MedagQ14BA6 303 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Naf1Q3UMQ8 489 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Slc30a10Q3UVU3 470 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr463Q5SW49 311 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr462Q5SW50 311 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Thoc6Q5U4D9 341 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Actr3bQ641P0 418 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Abcg1Q64343 666 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Zfp180Q6NZI9 655 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Phf11aQ8BVM9 293 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 ExogQ8C163 368 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 GatcQ8CBY0 155 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mettl21eQ8CDZ2 244 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Dnajc27Q8CFP6 273 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Angptl8Q8R1L8 198 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gpn2Q8VEJ1 310 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Bcas2Q9D287 225 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Sohlh2Q9D489 467 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Htr3bQ9JHJ5 437 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ttll2A4Q9E4 540 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Zfp808B8JJZ4 753 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ap1arE9PYF7 298 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Vmn2r85G3UW56 850 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ncam1P13595 1115 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mcpt2P15119 244 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Orm1Q60590 207 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pcbp2Q61990 362 aaKnown RBP11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Smad2Q62432 467 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Prdm4Q80V63 803 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cst13Q80ZN5 141 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Exosc1Q9DAA6 195 aaKnown RBP11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Wdr53Q9DB94 358 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 GhrlQ9EQX0 117 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nme7Q9QXL8 395 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 PnckQ9QYK9 343 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Vmn2r-ps130A0A140T8U3 855 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rex2A2AWF2 685 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Klhl4B1AZR0 717 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm1110F6Y113 635 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm21738J3QP72 227 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pole2O54956 527 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Atxn2O70305 1285 aaKnown RBP11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 UgdhO70475 493 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cyp4a10O88833 509 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nrsn1P97799 196 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Lasp1Q61792 263 aaKnown RBP11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 OmpQ64288 163 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Dusp16Q6PCP3 660 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr813Q7TRH5 310 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Hsfy2Q80Y37 392 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr1469Q8VFW5 309 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr1122Q8VGT9 326 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pcdhb20Q91XZ9 799 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 EedQ921E6 441 aaKnown RBP11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Wdr6Q99ME2 1125 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Atp13a2Q9CTG6 1169 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rcan2Q9JHG2 197 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Igkv5-43A0A0B4J1J2 115 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr675A0A1B0GSE1 317 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm13285B1AYI3 182 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm13275B1AYI8 182 aa11.43□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Zfp738B8JJX8 793 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms