RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Kif18bQ6PFD6 834 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vangl1Q80Z96 526 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Csnk1g1Q8BTH8 459 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Oas1gQ8K469 367 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Kctd5Q8VC57 234 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1052Q8VGR8 312 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pqbp1Q91VJ5 263 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Wdr45bQ9CR39 344 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ift22Q9DAI2 185 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pbld1Q9DCG6 288 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 CrnnD3YUU6 520 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r77E9PY60 306 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mapk12O08911 367 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Smad6O35182 495 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Csnk2bP67871 215 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fcho2Q3UQN2 809 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Syndig1lQ3USQ7 237 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1288Q7TQY0 312 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gadl1Q80WP8 550 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mapk8Q91Y86 384 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 BollQ924M5 281 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Grip1Q925T6 1127 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mat2bQ99LB6 334 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mgme1Q9CXC3 338 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 CroccQ8CJ40 2009 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1306A2BFL7 312 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fmo6J3QMN6 532 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 H2-K1P01901 369 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lsp1P19973 330 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sept4P28661 478 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tsc22d1P62500 1077 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Col6a2Q02788 1034 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Secisbp2Q3U1C4 858 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Foxj1Q61660 421 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Il20raQ6PHB0 546 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gpr142Q7TQN9 365 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mto1Q923Z3 669 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Npffr2Q924H0 417 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 MINDY3Q9CV28 444 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 FarsbQ9WUA2 589 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 RbpmsQ9WVB0 197 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Col4a3Q9QZS0 1669 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Zfp969A2ART2 485 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pate3B3GLJ3 98 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 ArntP53762 791 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sim1Q61045 765 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ppp2r1bQ7TNP2 601 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 MylipQ8BM54 445 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Oas1hQ8VI97 369 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Taldo1Q93092 337 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Raver1Q9CW46 748 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Yif1bQ9CX30 311 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Atp6ap2Q9CYN9 350 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 TheglQ9DA15 459 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Exosc1Q9DAA6 195 aaKnown RBP10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Clca3a1Q9QX15 902 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 RgrQ9Z2B3 291 aa10.92□□□□□ -0.66
Topbp1-201ENSMUST00000035164 4930433I11RikA0A0U1RPT6 723 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Xkr6E9Q6C8 638 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Bard1O70445 765 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ppm1aP49443 382 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cct3P80318 545 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Jmjd8Q3TA59 316 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Adamtsl4Q80T21 1036 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Enpp6Q8BGN3 440 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 IlvblQ8BU33 632 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Q8R2K8 148 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vwa1Q8R2Z5 415 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Recql5Q8VID5 982 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pcdhga9Q91XX9 932 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 EtfdhQ921G7 616 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Hyal6Q9D4E9 494 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Xylt2Q9EPL0 865 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fzd9Q9R216 592 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cst9Q9Z0H6 137 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cldn9Q9Z0S7 217 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm4969D3YZT1 566 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn2r91E9Q2U5 856 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Znf703P0CL69 594 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 LipcP27656 510 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Wdr75Q3U821 830 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nfatc2Q60591 927 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cdk6Q64261 326 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tas2r140Q7TQA4 312 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rnf130Q8VEM1 419 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tmed9Q99KF1 235 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mgat4dQ9D4R2 373 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 AcoxlQ9DBS4 632 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Zfp534A2A7A1 661 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Xpnpep3B7ZMP1 506 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fam46aD3Z5S8 447 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc27a6E9Q9W4 619 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8906L7N2A2 181 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Id2P41136 134 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lrpap1P55302 360 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tbx5P70326 518 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lcn3Q62471 182 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tm7sf2Q71KT5 418 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1046Q7TR79 316 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 DpcdQ8BPA8 203 aa10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms