RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Vmn1r29Q9EQ41 303 aa15.8■□□□□ 0.12
Shh-201ENSMUST00000002708 Ing1Q9QXV3 279 aa15.8■□□□□ 0.12
Shh-201ENSMUST00000002708 Cldn9Q9Z0S7 217 aa15.8■□□□□ 0.12
Shh-201ENSMUST00000002708 Fkbp9Q9Z247 570 aa15.8■□□□□ 0.12
Shh-201ENSMUST00000002708 1110002E22RikE0CYV9 1786 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm28576A0A087WRP6 222 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Mup6A2AV72 179 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm6356L7N2A7 188 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 IduaP48441 634 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Pcyt1aP49586 367 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Adra1bP97717 514 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Med26Q7TN02 588 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Atl1Q8BH66 558 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Cadm3Q99N28 396 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Ppil1Q9D0W5 166 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Skp2Q9Z0Z3 424 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Nt5c1aA3KFX0 365 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm2888K7N746 267 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Kpna3O35344 521 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Foxq1O70220 400 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Gas2P11862 314 aaKnown RBP15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Tmem253Q3UNB8 204 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm10696Q3UTC4 357 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 ClpbQ60649 677 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Sim1Q61045 765 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Ube2q1Q7TSS2 422 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Gpr62Q80UC6 358 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Fbxl3Q8C4V4 428 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Galnt13Q8CF93 556 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Cyp2j9Q924D1 502 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Clp1Q99LI9 425 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Wdr73Q9CWR1 371 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Qrsl1Q9CZN8 525 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Twist2Q9D030 160 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 Atp6ap1Q9R1Q9 463 aa15.79■□□□□ 0.12
Shh-201ENSMUST00000002708 KcpQ3U492 1550 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Zfp871G5E905 615 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm21800J3QMJ9 180 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Pebp1P70296 187 aaKnown RBP15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 RasefQ5RI75 627 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Bdkrb1Q61125 334 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Fblim1Q71FD7 375 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Olfr320Q7TRZ4 306 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Galnt7Q80VA0 657 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Trim36Q80WG7 729 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Them6Q80ZW2 207 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Krr1Q8BGA5 380 aaKnown RBP15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 PigzQ8BTP0 560 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Larp4Q8BWW4 719 aaKnown RBP15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm4922Q8C0N0 497 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Tmem72Q8C3K5 275 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Zfp57Q8C6P8 421 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Ints14Q8R3P6 515 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Acsl6Q91WC3 697 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Eif3mQ99JX4 374 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Spz1Q99MY0 378 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 2310003L06RikQ9CV82 495 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Cby3Q9CVN6 235 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Mrpl46Q9EQI8 283 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 SrrQ9QZX7 339 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm37596A0A0A6YXL2 336 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Rdh8D3Z6W3 317 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm17615E9Q9P2 165 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm3248K7N721 186 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Clcn7O70496 803 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Hoxb9P20615 250 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Cma1P21844 247 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Atxn1P54254 791 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Nxf3Q4ZGD9 553 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Cyp1b1Q64429 543 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Fam167aQ6P1G6 215 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Neu4Q8BZL1 478 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Trnt1Q8K1J6 434 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Map3k21Q8VDG6 1002 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Ndufs2Q91WD5 463 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Ift27Q9D0P8 186 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Spo11Q9WTK8 396 aa15.78■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm3696K7N751 203 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Hmox2O70252 315 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Cacng1O70578 223 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Man2a1P27046 1150 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Cyp17a1P27786 507 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Klrb1cP27814 223 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Aup1P70295 410 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 CamkmtQ3U2J5 323 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Havcr1Q5QNS5 305 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 ZfatQ7TS63 1237 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 F12Q80YC5 597 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 HopxQ8R1H0 73 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Dnase1l2Q9D1G0 278 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Fam122aQ9DB52 284 aa15.77■□□□□ 0.12
Shh-201ENSMUST00000002708 Esp18A8R0V1 91 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Il20rbE9Q9A6 308 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Sypl1O09117 261 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Fgf18O89101 207 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 P04214 136 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Bcl6P41183 707 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 CtskP55097 329 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Mapk1P63085 358 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc10a2P70172 348 aa15.77■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms