RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CERS1P27544 350 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 PPP2R1BP30154 601 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 SLC26A5P58743 744 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 ILF2Q12905 390 aaKnown RBP16.63■□□□□ 0.25
PNKP-230ENST00000638016 CHIT1Q13231 466 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 NAB1Q13506 487 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 TBC1D1Q86TI0 1168 aaPredicted RBP16.63■□□□□ 0.25
PNKP-230ENST00000638016 KRT78Q8N1N4 520 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 RNF175Q8N4F7 328 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 MMGT1Q8N4V1 131 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 FAM47BQ8NA70 645 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 SSC4DQ8WTU2 575 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 QRFPRQ96P65 431 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 CSF3RQ99062 836 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 LPAR4Q99677 370 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 CD244Q9BZW8 370 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 CDC42EP4Q9H3Q1 356 aaKnown RBP16.63■□□□□ 0.25
PNKP-230ENST00000638016 CNOT10Q9H9A5 744 aaKnown RBP16.63■□□□□ 0.25
PNKP-230ENST00000638016 AGPAT4Q9NRZ5 378 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 NUDT4Q9NZJ9 180 aa16.63■□□□□ 0.25
PNKP-230ENST00000638016 CROCCQ5TZA2 2017 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 MAST4O15021 2626 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 TRAV17A0A0B4J275 112 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 MYOCOSA0A1B0GUC4 107 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 OR5H15A6NDH6 313 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 URADA6NGE7 173 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 PRMT3O60678 531 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 ACSL3O95573 720 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 ALDOAP04075 364 aaKnown RBP16.62■□□□□ 0.25
PNKP-230ENST00000638016 S100BP04271 92 aaPredicted RBP16.62■□□□□ 0.25
PNKP-230ENST00000638016 RNH1P13489 461 aaKnown RBP16.62■□□□□ 0.25
PNKP-230ENST00000638016 JAK1P23458 1154 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 CRABP2P29373 138 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 STXBP1P61764 594 aaKnown RBP16.62■□□□□ 0.25
PNKP-230ENST00000638016 CDKL4Q5MAI5 379 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 ACER2Q5QJU3 275 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 H3F3CQ6NXT2 135 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 FAM180AQ6UWF9 173 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 QSOX2Q6ZRP7 698 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 ST6GALNAC3Q8NDV1 305 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
PNKP-230ENST00000638016 STAG3L4Q8TBR4 150 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 M1APQ8TC57 530 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 WDR34Q96EX3 536 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 PTCD3Q96EY7 689 aaKnown RBP16.62■□□□□ 0.25
PNKP-230ENST00000638016 SIGLEC12Q96PQ1 595 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 F2RL3Q96RI0 385 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 NMRAL1Q9HBL8 299 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 MMP25Q9NPA2 562 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 CLDN16Q9Y5I7 305 aa16.62■□□□□ 0.25
PNKP-230ENST00000638016 DOPEY1Q5JWR5 2465 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 TCRBV16S1A1N1A0A5B0 115 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 ANKDD1BA6NHY2 528 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 PSMD12O00232 456 aaPredicted RBP16.61■□□□□ 0.25
PNKP-230ENST00000638016 RTCAO00442 366 aaKnown RBP16.61■□□□□ 0.25
PNKP-230ENST00000638016 CLEC3AO75596 197 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 SKP1P63208 163 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 IRF8Q02556 426 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 EXT1Q16394 746 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 ADPRMQ3LIE5 342 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 LRRC70Q7Z2Q7 622 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 UBE3DQ7Z6J8 389 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 CLNKQ7Z7G1 428 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 PLD6Q8N2A8 252 aaKnown RBP16.61■□□□□ 0.25
PNKP-230ENST00000638016 SLX1AQ9BQ83 275 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 REXO4Q9GZR2 422 aaKnown RBP16.61■□□□□ 0.25
PNKP-230ENST00000638016 RNF32Q9H0A6 362 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 EHD1Q9H4M9 534 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 ACSS3Q9H6R3 686 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 NT5DC2Q9H857 520 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 PRDM9Q9NQV7 894 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 OLAHQ9NV23 265 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 ZNF358Q9NW07 568 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 ACOT9Q9Y305 439 aa16.61■□□□□ 0.25
PNKP-230ENST00000638016 A0A096LPK6 155 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 SAGE2PA6NJ88 616 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 MST1P26927 711 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 MSH2P43246 934 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 TDGF1P3P51864 188 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 KCNK10P57789 538 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 TUBA3CQ13748 450 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 ELOAQ14241 798 aaKnown RBP16.6■□□□□ 0.25
PNKP-230ENST00000638016 ZNF468Q5VIY5 522 aaPredicted RBP16.6■□□□□ 0.25
PNKP-230ENST00000638016 FAM219BQ5XKK7 198 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 ZNF324BQ6AW86 544 aaPredicted RBP16.6■□□□□ 0.25
PNKP-230ENST00000638016 NIPAL1Q6NVV3 410 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 RPUSD3Q6P087 351 aaKnown RBP16.6■□□□□ 0.25
PNKP-230ENST00000638016 ABHD17CQ6PCB6 329 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 TUBA3EQ6PEY2 450 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 ZNF793Q6ZN11 406 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 BCORP1Q8N888 145 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 NFAM1Q8NET5 270 aaPredicted RBP16.6■□□□□ 0.25
PNKP-230ENST00000638016 TTLQ8NG68 377 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 OR2L5Q8NG80 312 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 ELP5Q8TE02 316 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 UBTD2Q8WUN7 234 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 SREK1Q8WXA9 508 aaKnown RBP16.6■□□□□ 0.25
PNKP-230ENST00000638016 FAR2Q96K12 515 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 GPR78Q96P69 363 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms