RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 KLHDC8AQ8IYD2 350 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 CPSF7Q8N684 471 aaKnown RBP17.26■□□□□ 0.35
CLN6-220ENST00000637450 APCDD1LQ8NCL9 501 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 FBXO36Q8NEA4 188 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 RHBDF1Q96CC6 855 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 MCMBPQ9BTE3 642 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 CTNNAL1Q9UBT7 734 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 MMACHCQ9Y4U1 282 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 CSMD2Q7Z408 3487 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 PKDREJQ9NTG1 2253 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 DCHS2Q6V1P9 2916 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 AKAP9Q99996 3911 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 E7ESA3 106 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 FCHO1O14526 889 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 COX6B1P14854 86 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 ZNF24P17028 368 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 ELAVL4P26378 380 aaKnown RBP17.25■□□□□ 0.35
CLN6-220ENST00000637450 STXBP1P61764 594 aaKnown RBP17.25■□□□□ 0.35
CLN6-220ENST00000637450 CBLBQ13191 982 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 RUNX2Q13950 521 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 FASTKD3Q14CZ7 662 aaKnown RBP17.25■□□□□ 0.35
CLN6-220ENST00000637450 CDSNQ15517 529 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 TERF2Q15554 542 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 TSNQ15631 228 aaKnown RBP17.25■□□□□ 0.35
CLN6-220ENST00000637450 TMIGD1Q6UXZ0 262 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 ADAMTSL2Q86TH1 951 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLN6-220ENST00000637450 TTLQ8NG68 377 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 GAL3ST3Q96A11 431 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 TMEM125Q96AQ2 219 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 VPS39Q96JC1 886 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 FAR2Q96K12 515 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 NPLQ9BXD5 320 aaPredicted RBP17.25■□□□□ 0.35
CLN6-220ENST00000637450 KCNF1Q9H3M0 494 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 POPDC3Q9HBV1 291 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 GPAMQ9HCL2 828 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 PPIEQ9UNP9 301 aaKnown RBP17.25■□□□□ 0.35
CLN6-220ENST00000637450 PDZD2O15018 2839 aa17.25■□□□□ 0.35
CLN6-220ENST00000637450 ADGRG4Q8IZF6 3080 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 LRIT2A6NDA9 550 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 ZNHIT1O43257 154 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 WDR47O94967 919 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 SNRPB2P08579 225 aaKnown RBP17.24■□□□□ 0.35
CLN6-220ENST00000637450 ABOP16442 354 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 HNRNPH1P31943 449 aaKnown RBP17.24■□□□□ 0.35
CLN6-220ENST00000637450 CLCN2P51788 898 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 HSF1Q00613 529 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 FRA10AC1Q70Z53 315 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 GDF7Q7Z4P5 450 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 FGD2Q7Z6J4 655 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 DOLPP1Q86YN1 238 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 SCUBE1Q8IWY4 988 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 POGLUT1Q8NBL1 392 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 B3GNT7Q8NFL0 401 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 AGAP11Q8TF27 550 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 MS4A6EQ96DS6 147 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 SEC16BQ96JE7 1060 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 PHF12Q96QT6 1004 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 TRIM31Q9BZY9 425 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 RHOJQ9H4E5 214 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 NT5DC2Q9H857 520 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 NSMCE4AQ9NXX6 385 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 ASB1Q9Y576 335 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 CLDN16Q9Y5I7 305 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 TACC2O95359 2948 aa17.24■□□□□ 0.35
CLN6-220ENST00000637450 MYO1DO94832 1006 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 CLDN14O95500 239 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 GSTM2P28161 218 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 GPR143P51810 404 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 HSD17B7P56937 341 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 ILF2Q12905 390 aaKnown RBP17.23■□□□□ 0.35
CLN6-220ENST00000637450 SLBPQ14493 270 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLN6-220ENST00000637450 TGFBIQ15582 683 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 SULF2Q8IWU5 870 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 KRT78Q8N1N4 520 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 MTFMTQ96DP5 389 aaKnown RBP17.23■□□□□ 0.35
CLN6-220ENST00000637450 PDLIM2Q96JY6 352 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 QRFPRQ96P65 431 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 PITHD1Q9GZP4 211 aaPredicted RBP17.23■□□□□ 0.35
CLN6-220ENST00000637450 DERL2Q9GZP9 239 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 PNO1Q9NRX1 252 aaKnown RBP17.23■□□□□ 0.35
CLN6-220ENST00000637450 GPRC5BQ9NZH0 403 aa17.23■□□□□ 0.35
CLN6-220ENST00000637450 KLF13Q9Y2Y9 288 aaPredicted RBP17.23■□□□□ 0.35
CLN6-220ENST00000637450 A0A0G2JN53 185 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 TRBV11-1A0A0K0K1C0 115 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 NCF1BA6NI72 391 aaPredicted RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 NCF1CA8MVU1 366 aaPredicted RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 EFCAB8A8MWE9 144 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 E9PLN8 166 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 KLRC4-KLRK1H3BQV0 150 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 TGFBR3LH3BV60 316 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 CCDC188H7C350 402 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 C19orf84I3L1E1 186 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 CLDN4O14493 209 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 ADAM10O14672 748 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 TAPBPO15533 448 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 ERI3O43414 337 aaKnown RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 CLEC3AO75596 197 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 WISP3O95389 354 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms