RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 FAR2Q96K12 515 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 KCNC2Q96PR1 638 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 TBCDQ9BTW9 1192 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 ACPTQ9BZG2 426 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 ZNF304Q9HCX3 659 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 SLC22A11Q9NSA0 550 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 SLC12A4Q9UP95 1085 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 DNAJC15Q9Y5T4 150 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 MAU2Q9Y6X3 613 aa15.17■□□□□ 0.02
CLN6-216ENST00000636876 A0A088AWK7 358 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 ZNF860A6NHJ4 632 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 PLPP1O14494 284 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 RDH16O75452 317 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 PIM1P11309 404 aaPredicted RBP15.16■□□□□ 0.02
CLN6-216ENST00000636876 ZNF10P21506 573 aaPredicted RBP15.16■□□□□ 0.02
CLN6-216ENST00000636876 RPL14P50914 215 aaKnown RBP15.16■□□□□ 0.02
CLN6-216ENST00000636876 ARFIP1P53367 373 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 BTN3A2P78410 334 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 TGIF1Q15583 401 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 ARHGAP40Q5TG30 622 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 FAM198BQ6UWH4 519 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 COX15Q7KZN9 410 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 TRIM46Q7Z4K8 759 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 AMER3Q8N944 861 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 CT55Q8WUE5 264 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 TWIST2Q8WVJ9 160 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 COL26A1Q96A83 441 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 MAGEB18Q96M61 343 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 ROGDIQ9GZN7 287 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 TUBB1Q9H4B7 451 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 PRDM7Q9NQW5 492 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 NMRK1Q9NWW6 199 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 IFT80Q9P2H3 777 aaPredicted RBP15.16■□□□□ 0.02
CLN6-216ENST00000636876 VPS29Q9UBQ0 182 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 ZMIZ1Q9ULJ6 1067 aa15.16■□□□□ 0.02
CLN6-216ENST00000636876 C9J4A7 227 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 SLC28A1O00337 649 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 RTCAO00442 366 aaKnown RBP15.15■□□□□ 0.02
CLN6-216ENST00000636876 PIP5K1BO14986 540 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 SCELO95171 688 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 ATXN8OSP0DMR3 200 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 ATP5A1P25705 553 aaKnown RBP15.15■□□□□ 0.02
CLN6-216ENST00000636876 SSR2P43308 183 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 TSFMP43897 325 aaKnown RBP15.15■□□□□ 0.02
CLN6-216ENST00000636876 HMGCS1Q01581 520 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 CLN3Q13286 438 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 SLC9A5Q14940 896 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 IMPG1Q17R60 797 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 AP5B1Q2VPB7 878 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 OR4C11Q6IEV9 310 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 ZNF793Q6ZN11 406 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 RGS9BPQ6ZS82 235 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 OVCH1Q7RTY7 1134 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 IL22RA1Q8N6P7 574 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 ZNF248Q8NDW4 579 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 FKBP10Q96AY3 582 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 SERINC2Q96SA4 455 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 ZNF717Q9BY31 904 aaPredicted RBP15.15■□□□□ 0.02
CLN6-216ENST00000636876 MRPL1Q9BYD6 325 aaKnown RBP15.15■□□□□ 0.02
CLN6-216ENST00000636876 COPS7BQ9H9Q2 264 aaPredicted RBP15.15■□□□□ 0.02
CLN6-216ENST00000636876 CLK4Q9HAZ1 481 aaKnown RBP15.15■□□□□ 0.02
CLN6-216ENST00000636876 PNPOQ9NVS9 261 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 HCN3Q9P1Z3 774 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 CROTQ9UKG9 612 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 MAP4K5Q9Y4K4 846 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 PTGDR2Q9Y5Y4 395 aa15.15■□□□□ 0.02
CLN6-216ENST00000636876 LOC101059948A0A1B0GTJ6 334 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 TERTO14746 1132 aaKnown RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 B3GALT2O43825 422 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 SKAP2O75563 359 aaPredicted RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 RAB40ALP0C0E4 278 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 LINC00032P0C843 101 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 TCN2P20062 427 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 HIST1H1TP22492 207 aaPredicted RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 CERS1P27544 350 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 BSGP35613 385 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 MTTPP55157 894 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 MAT1AQ00266 395 aaKnown RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 TBL3Q12788 808 aaKnown RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 DNASE1L3Q13609 305 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 NCF4Q15080 339 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 MLIPQ5VWP3 458 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 DDIASQ8IXT1 998 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 METTL4Q8N3J2 472 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 ACOT4Q8N9L9 421 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 OR5T3Q8NGG3 340 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 KCNE4Q8WWG9 221 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 NAF1Q96HR8 494 aaKnown RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 C7orf26Q96N11 449 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 SORBS1Q9BX66 1292 aaKnown RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 NPLQ9BXD5 320 aaPredicted RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 DDX31Q9H8H2 851 aaKnown RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 SLCO1B3Q9NPD5 702 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 AHSPQ9NZD4 102 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 TRPC4Q9UBN4 977 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 CTSFQ9UBX1 484 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 GPN3Q9UHW5 284 aaPredicted RBP15.14■□□□□ 0.01
CLN6-216ENST00000636876 CCL27Q9Y4X3 112 aa15.14■□□□□ 0.01
CLN6-216ENST00000636876 URB1O60287 2271 aaKnown RBP15.13■□□□□ 0.01
CLN6-216ENST00000636876 C21orf140B9A014 251 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms