RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	OR5K4	A6NMS3	321 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	PSMD11	O00231	422 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	ADAMDEC1	O15204	470 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	C1GALT1C1L	P0DN25	315 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	OR1E2	P47887	323 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	DLG1	Q12959	904 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	ABHD13	Q7L211	337 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	SPRED2	Q7Z698	418 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	LNX2	Q8N448	690 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	OR5AR1	Q8NGP9	310 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	SNIP1	Q8TAD8	396 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	PTER	Q96BW5	349 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	SLC39A13	Q96H72	371 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	RBM4B	Q9BQ04	359 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	MACROD1	Q9BQ69	325 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	RBM4	Q9BWF3	364 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	SPATA7	Q9P0W8	599 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	DNAJC15	Q9Y5T4	150 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	DDX60L	Q5H9U9	1706 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	ACACA	Q13085	2346 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	DFNA5	O60443	496 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	MFN2	O95140	757 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	HOXD9	P28356	352 aa	Predicted RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	LSAMP	Q13449	338 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	TOP3A	Q13472	1001 aa	Predicted RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	TRIQK	Q629K1	86 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	NFKBID	Q8NI38	313 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	FUBP1	Q96AE4	644 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	CDC6	Q99741	560 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	SLC29A3	Q9BZD2	475 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	DRGX	A6NNA5	263 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	RPS26	P62854	115 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	EMX2	Q04743	252 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	CARTPT	Q16568	116 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	OR52E8	Q6IFG1	317 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	DPY19L2P1	Q6NXN4	242 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	THAP5	Q7Z6K1	395 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	PEX13	Q92968	403 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	ZSWIM3	Q96MP5	696 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	SLITRK2	Q9H156	845 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	POLR2J3	Q9H1A7	115 aa	Known RBP	13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	ZIM2	Q9NZV7	527 aa		13.78	□□□□□ -0.2
NEDD4L-238	ENST00000635997	CH25H	O95992	272 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	BCKDHA	P12694	445 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	MPL	P40238	635 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	OLR1	P78380	273 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	ASRGL1	Q7L266	308 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	DGAT2	Q96PD7	388 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	ZNF382	Q96SR6	550 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	EHD3	Q9NZN3	535 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	PDE10A	Q9Y233	779 aa		13.77	□□□□□ -0.2
NEDD4L-238	ENST00000635997	TRBC2	A0A5B9	178 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	C4orf47	A7E2U8	309 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TAF4	O00268	1085 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	XKRY	O14609	159 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PCDHGA12	O60330	932 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	STX11	O75558	287 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PRDX3	P30048	256 aa	Known RBP	13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CLCN7	P51798	805 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DGUOK	Q16854	277 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TIMM50	Q3ZCQ8	353 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FAM220A	Q7Z4H9	259 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RNF130	Q86XS8	419 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GATS	Q8NAP1	163 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR10H5	Q8NGA6	315 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GAL3ST1	Q99999	423 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	HCN3	Q9P1Z3	774 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997		H3BSA7	217 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GFRA2	O00451	464 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	UBXN7	O94888	489 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CCKBR	P32239	447 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	IL12RB1	P42701	662 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	STEAP4	Q687X5	459 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	LIPI	Q6XZB0	460 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	WFDC5	Q8TCV5	224 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PTCHD1	Q96NR3	888 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TBX5	Q99593	518 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CDADC1	Q9BWV3	514 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	MUC6	Q6W4X9	2439 aa		13.77	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CCNB2	O95067	398 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CLIC3	O95833	236 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ALPP	P05187	535 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	IL3	P08700	152 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RAP2A	P10114	183 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FDXR	P22570	491 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CNR2	P34972	360 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GRK6	P43250	576 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZNF763	Q0D2J5	394 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CRB2	Q5IJ48	1285 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SMRP1	Q8NCR6	262 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR6K6	Q8NGW6	343 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR8K5	Q8NH50	307 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PRDM8	Q9NQV8	689 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RARRES3	Q9UL19	164 aa		13.76	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PHIP	Q8WWQ0	1821 aa		13.76	□□□□□ -0.21

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