RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 APOBEC3BQ9UH17 382 aaKnown RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 MED16Q9Y2X0 877 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 CEP250Q9BV73 2442 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 PRSS38A1L453 326 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 CDC7O00311 574 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 SLC25A14O95258 325 aaPredicted RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 CELA2BP08218 269 aaPredicted RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 HOXC4P09017 264 aaPredicted RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 PCNAP12004 261 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 FMO4P31512 558 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 CDKN1CP49918 316 aaPredicted RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 MTPNP58546 118 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 SRP54P61011 504 aaKnown RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 CDC20Q12834 499 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 CDK5R2Q13319 367 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 CTU2Q2VPK5 515 aaKnown RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 SYT6Q5T7P8 510 aaPredicted RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 ZDHHC20Q5W0Z9 365 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 PLEKHG7Q6ZR37 379 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 OXR1Q8N573 874 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 OR6Q1Q8NGQ2 317 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 METTL6Q8TCB7 284 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 BTN2A2Q8WVV5 523 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 FAR1Q8WVX9 515 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 FIG4Q92562 907 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 CCDC97Q96F63 343 aaPredicted RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 PIF1Q9H611 641 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 SP140LQ9H930 580 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 SMURF2Q9HAU4 748 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 CPNE5Q9HCH3 593 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 SCN3BQ9NY72 215 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 ANKMY1Q9P2S6 941 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 TRMT6Q9UJA5 497 aaKnown RBP14.87□□□□□ -0.03
CLN8-209ENST00000635970 SLC17A4Q9Y2C5 497 aa14.87□□□□□ -0.03
CLN8-209ENST00000635970 LSM1O15116 133 aaKnown RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 PIAS2O75928 621 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 PRKD3O94806 890 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 OR4F21O95013 312 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 IL6P05231 212 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 PKMP14618 531 aaKnown RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 CD40LGP29965 261 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 TTPAP49638 278 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 HK3P52790 923 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 EMX1Q04741 257 aaPredicted RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 C1orf61Q13536 156 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 KEAP1Q14145 624 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 KIAA0040Q15053 153 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 HIST2H2ACQ16777 129 aaPredicted RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 DEPDC1Q5TB30 811 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 ATG9BQ674R7 924 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 TMEM53Q6P2H8 277 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 TUBA3EQ6PEY2 450 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 CADM3Q8N126 398 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 ARL10Q8N8L6 244 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 SAP25Q8TEE9 199 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 SLC13A3Q8WWT9 602 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 PDLIM5Q96HC4 596 aaKnown RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 GPR21Q99679 349 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 LRRC61Q9BV99 259 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 ASPSCR1Q9BZE9 553 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 DUSP21Q9H596 190 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 ASB8Q9H765 288 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 DCAF13Q9NV06 445 aaKnown RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 CD274Q9NZQ7 290 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 EIF3LQ9Y262 564 aaKnown RBP14.86□□□□□ -0.03
CLN8-209ENST00000635970 BTBD3Q9Y2F9 522 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 DGKBQ9Y6T7 804 aa14.86□□□□□ -0.03
CLN8-209ENST00000635970 NPEPPSL1A6NEC2 478 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 INMTO95050 263 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 G6PDP11413 515 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 CD59P13987 128 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 KELP23276 732 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 DGKAP23743 735 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 SOX11P35716 441 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 PIGAP37287 484 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 DCTP40126 519 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 GNPDA1P46926 289 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 AGTR2P50052 363 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ST13P50502 369 aaKnown RBP14.85□□□□□ -0.03
CLN8-209ENST00000635970 CYP4F3Q08477 520 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 NFATC2Q13469 925 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 SELPLGQ14242 412 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 INAQ16352 499 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 PRRT3Q5FWE3 981 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 LAIR2Q6ISS4 152 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ADCK1Q86TW2 530 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 MFSD4AQ8N468 514 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 CDYL2Q8N8U2 506 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 NETO1Q8TDF5 533 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 KCNJ9Q92806 393 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 FAM162AQ96A26 154 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 YIPF6Q96EC8 236 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 VPS35Q96QK1 796 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 GABARAPL1Q9H0R8 117 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 ACTL8Q9H568 366 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 CARS2Q9HA77 564 aaKnown RBP14.85□□□□□ -0.03
CLN8-209ENST00000635970 PRKAB1Q9Y478 270 aa14.85□□□□□ -0.03
CLN8-209ENST00000635970 MAGED1Q9Y5V3 778 aaPredicted RBP14.85□□□□□ -0.03
CLN8-209ENST00000635970 H7C0S8 307 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms