RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 C2orf42Q9NWW7 574 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FNIP2Q9P278 1114 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DNAJB11Q9UBS4 358 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PCTPQ9UKL6 214 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MAP2K7O14733 419 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DLX3O60479 287 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MMP20O60882 483 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 AKR1C4P17516 323 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 EFNA1P20827 205 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CBLP22681 906 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 VSX2P58304 361 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ARL16Q0P5N6 197 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FSTL1Q12841 308 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 HNRNPDQ14103 355 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 HERC3Q15034 1050 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 NCEH1Q6PIU2 408 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MON1BQ7L1V2 547 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GRASPQ7Z6J2 395 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CCDC71LQ8N9Z2 235 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PAPD5Q8NDF8 572 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GLYATL2Q8WU03 294 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SLC13A3Q8WWT9 602 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CREB3L1Q96BA8 519 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 KCNC2Q96PR1 638 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PKP4Q99569 1192 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SSX3Q99909 188 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 LACRTQ9GZZ8 138 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 KAT8Q9H7Z6 458 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 UNKLQ9H9P5 680 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM9Q9P0T7 183 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RABL2AQ9UBK7 228 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RABL2BQ9UNT1 228 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RPL26L1Q9UNX3 145 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF451Q9Y4E5 1061 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MYH2Q9UKX2 1941 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RP2O75695 350 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RPL17P18621 184 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PSMA6P60900 246 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TUBA4AP68366 448 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ADAM17P78536 824 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ELF3P78545 371 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PTPRRQ15256 657 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 C6orf52Q5T4I8 152 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ADGRF1Q5T601 910 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 AADACL2Q6P093 401 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DCUN1D3Q8IWE4 304 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 OR9A2Q8NGT5 310 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 LRRN4Q8WUT4 740 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SORCS1Q8WY21 1168 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PRR11Q96HE9 360 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MYRFLQ96LU7 910 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TGM7Q96PF1 710 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 P2RY13Q9BPV8 354 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CHRAC1Q9NRG0 131 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ACTR3BQ9P1U1 418 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RARRES3Q9UL19 164 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PPRC1Q5VV67 1664 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 LRRTM2O43300 516 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PTHP01270 115 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TYRP14679 529 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ADH6P28332 368 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 LUMP51884 338 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 AKR1C2P52895 323 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FGL1Q08830 312 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MPPED2Q15777 294 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SPRYD7Q5W111 196 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 STEAP3Q658P3 488 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GPR153Q6NV75 609 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SLC36A4Q6YBV0 504 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 NYAP1Q6ZVC0 841 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 XYLT1Q86Y38 959 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MARCH9Q86YJ5 346 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 LSM14AQ8ND56 463 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 OR5L1Q8NGL2 311 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 NDRG1Q92597 394 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TFGQ92734 400 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TXNDC15Q96J42 360 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 BMFQ96LC9 184 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PTCHD1Q96NR3 888 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 NECTIN4Q96NY8 510 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 LENG8Q96PV6 779 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 HDHD5Q9BXW7 423 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 C12orf65Q9H3J6 166 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 LRRN3Q9H3W5 708 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 C8orf33Q9H7E9 229 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SFXN1Q9H9B4 322 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DYNLRB1Q9NP97 96 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GKN1Q9NS71 199 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TRNAU1APQ9NX07 287 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MGAT4CQ9UBM8 478 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ABCA6Q8N139 1617 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TVP23AA6NH52 213 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 AXIN1O15169 862 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GRID2O43424 1007 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CREBL2O60519 120 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 POP7O75817 140 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 H6PDO95479 791 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MT-ND2P03891 347 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms