RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	SPACA3	Q8IXA5	215 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	CLYBL	Q8N0X4	340 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	QRFPR	Q96P65	431 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	HBEGF	Q99075	208 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	FAM117A	Q9C073	453 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	ROGDI	Q9GZN7	287 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	MANSC1	Q9H8J5	431 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	ZNF395	Q9H8N7	513 aa	Predicted RBP	24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	COPS7B	Q9H9Q2	264 aa	Predicted RBP	24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	PRDM7	Q9NQW5	492 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	NMRK1	Q9NWW6	199 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	TRPC4	Q9UBN4	977 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	KCND3	Q9UK17	655 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	FIS1	Q9Y3D6	152 aa		24.65	■■□□□ 1.54
UBE3A-222	ENST00000630907	F8A1	P23610	371 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	MAT1A	Q00266	395 aa	Known RBP	24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	CSTF3	Q12996	717 aa	Known RBP	24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	ABRAXAS2	Q15018	415 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	AP5B1	Q2VPB7	878 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	KANK2	Q63ZY3	851 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	ENDOV	Q8N8Q3	282 aa	Known RBP	24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	GBP7	Q8N8V2	638 aa	Predicted RBP	24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	CLK4	Q9HAZ1	481 aa	Known RBP	24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	INTS9	Q9NV88	658 aa	Known RBP	24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	HCN3	Q9P1Z3	774 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	ZDHHC2	Q9UIJ5	367 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	SLC12A4	Q9UP95	1085 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	MAP4K5	Q9Y4K4	846 aa		24.64	■■□□□ 1.54
UBE3A-222	ENST00000630907	SERTM1	A2A2V5	107 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	RTCA	O00442	366 aa	Known RBP	24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	SEMA3D	O95025	777 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	CHEK2	O96017	543 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	PTPN4	P29074	926 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	ARFIP1	P53367	373 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	MTTP	P55157	894 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	SYT16	Q17RD7	645 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	OR4C11	Q6IEV9	310 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	SCIMP	Q6UWF3	145 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	OR5T3	Q8NGG3	340 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	AGR3	Q8TD06	166 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	DYDC1	Q8WWB3	177 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	CCNL2	Q96S94	520 aa	Predicted RBP	24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	SERINC2	Q96SA4	455 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	C20orf27	Q9GZN8	174 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	SLC26A1	Q9H2B4	701 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	AHSP	Q9NZD4	102 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	CTSF	Q9UBX1	484 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	ZNF282	Q9UDV7	671 aa	Predicted RBP	24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	IL17B	Q9UHF5	180 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	PADI2	Q9Y2J8	665 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	PCDHGA6	Q9Y5G7	932 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	FER1L5	A0AVI2	2057 aa		24.63	■■□□□ 1.53
UBE3A-222	ENST00000630907	PLPP1	O14494	284 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	B3GALT2	O43825	422 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	SSR2	P43308	183 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	OLR1	P78380	273 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	OCA2	Q04671	838 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	SRSF6	Q13247	344 aa	Known RBP	24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	NKG7	Q16617	165 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	OR51Q1	Q8NH59	317 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	NPL	Q9BXD5	320 aa	Predicted RBP	24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	ACPT	Q9BZG2	426 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	ILKAP	Q9H0C8	392 aa	Predicted RBP	24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	MKKS	Q9NPJ1	570 aa	Predicted RBP	24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	THAP1	Q9NVV9	213 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	VPS29	Q9UBQ0	182 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	SSUH2	Q9Y2M2	353 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	RAP2C	Q9Y3L5	183 aa		24.62	■■□□□ 1.53
UBE3A-222	ENST00000630907	URB1	O60287	2271 aa	Known RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	SCN3A	Q9NY46	2000 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	IGLV3-12	A0A075B6K2	115 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	TMEM233	B4DJY2	109 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	CHST10	O43529	356 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	CNOT3	O75175	753 aa	Known RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	DNAJB6	O75190	326 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	HIST1H1T	P22492	207 aa	Predicted RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	ATP5A1	P25705	553 aa	Known RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	TSFM	P43897	325 aa	Known RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	BROX	Q5VW32	411 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	ARFGAP2	Q8N6H7	521 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	ACOT4	Q8N9L9	421 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	STT3B	Q8TCJ2	826 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	ZNF75CP	Q92670	426 aa	Predicted RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	CNTNAP3B	Q96NU0	1288 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	SORT1	Q99523	831 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	SORBS1	Q9BX66	1292 aa	Known RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	CNTNAP3	Q9BZ76	1288 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	WDR54	Q9H977	334 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	NXT1	Q9UKK6	140 aa	Known RBP	24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907	DNAJC15	Q9Y5T4	150 aa		24.61	■■□□□ 1.53
UBE3A-222	ENST00000630907		A0A087WV48	116 aa		24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	VSTM2B	A6NLU5	285 aa		24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	KLF11	O14901	512 aa		24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	SNN	O75324	88 aa	Predicted RBP	24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	CERS1	P27544	350 aa		24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	RPS18	P62269	152 aa	Known RBP	24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	RUNX2	Q13950	521 aa		24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	UGT3A2	Q3SY77	523 aa		24.6	■■□□□ 1.53
UBE3A-222	ENST00000630907	VWA2	Q5GFL6	755 aa		24.6	■■□□□ 1.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms