RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 DBF4Q9UBU7 674 aaPredicted RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 SH3GLB1Q9Y371 365 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 PRRC2AP48634 2157 aaKnown RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 A0A087WV48 116 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 A0A1B0GTH9 108 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 NKX6-3A6NJ46 265 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 RPL37AP8A6NKH3 93 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 ZNF732B4DXR9 585 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 NPIPA3F8WFD2 350 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 RNF103O00237 685 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 PHOX2AO14813 284 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 GPRIN2O60269 458 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 SELENOFO60613 162 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 EIF5BO60841 1220 aaKnown RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 MOCS2O96007 188 aaPredicted RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 RENP00797 406 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 IGKV3-15P01624 115 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 TSPY3P0CV98 308 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 TSPY8P0CW00 308 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 LMO2P25791 158 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 SRD5A2P31213 254 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 TIA1P31483 386 aaKnown RBP eCLIP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 OR3A1P47881 315 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 BACE1P56817 501 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 TSPY1Q01534 308 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 ACY1Q03154 408 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 CNTN1Q12860 1018 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 C9orf66Q5T8R8 295 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 CAVIN1Q6NZI2 390 aaKnown RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 SPATA31D1Q6ZQQ2 1576 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 C15orf52Q6ZUT6 534 aaKnown RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 FAM47EQ6ZV65 393 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 SPATA19Q7Z5L4 167 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 MEX3DQ86XN8 651 aaKnown RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 CD99L2Q8TCZ2 262 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 SAP25Q8TEE9 199 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 SNRNP27Q8WVK2 155 aaKnown RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 SMPDL3AQ92484 453 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 NABP1Q96AH0 204 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 RAB3IPQ96QF0 476 aaPredicted RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 FERMT1Q9BQL6 677 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 LRRCC1Q9C099 1032 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 LIME1Q9H400 295 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 C10orf88Q9H8K7 445 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 MINDY3Q9H8M7 445 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 MOB1AQ9H8S9 216 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 WDR41Q9HAD4 459 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 PLEKHA3Q9HB20 300 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 GIMAP2Q9UG22 337 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 ZNF107Q9UII5 783 aaPredicted RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 GMEB2Q9UKD1 530 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 TSPAN16Q9UKR8 245 aa1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 HBS1LQ9Y450 684 aaKnown RBP1.87□□□□□ -2.11
SCARNA4-201ENST00000629045 A0A087WWV3 80 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TRAV34A0A0B4J273 112 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 IGHV3-16A0A0C4DH30 117 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 IQCMA0A1B0GVH7 501 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 LOC390937A0A1W2PQ73 354 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 HTR3EA5X5Y0 456 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 ZNF840PA6NDX5 716 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 C5orf52A6NGY3 159 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 H7C0S8 307 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 INPP4BO15327 924 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 ST8SIA3O43173 380 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TIMM44O43615 452 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 ANGPTL1O95841 491 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 RPN1P04843 607 aaKnown RBP1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 HSP90AA1P07900 732 aaKnown RBP1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 VIMP08670 466 aaKnown RBP1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 DNAH10OSP0CZ25 163 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 FCGR2BP31994 310 aaPredicted RBP1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 FCGR2CP31995 323 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 SLC1A3P43003 542 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 OR3A3P47888 321 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 NAGLUP54802 743 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 PPA1Q15181 289 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 ECSCRQ19T08 205 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TMEM44Q2T9K0 475 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TEX35Q5T0J7 233 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TCEAL6Q6IPX3 200 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 NEPROQ6NW34 567 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 SLC27A4Q6P1M0 643 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 SHQ1Q6PI26 577 aaKnown RBP1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TIGD4Q8IY51 512 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 THNSL1Q8IYQ7 743 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 SLC43A2Q8N370 569 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 C4orf32Q8N8J7 132 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 SETD6Q8TBK2 473 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TSSK2Q96PF2 358 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 GBP5Q96PP8 586 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 TNFRSF13CQ96RJ3 184 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 SLC39A8Q9C0K1 460 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 STRADBQ9C0K7 418 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 MTIF3Q9H2K0 278 aaKnown RBP1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 UBQLN3Q9H347 655 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 DEPPQ9NTK1 212 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 PCDHGA1Q9Y5H4 931 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 AUP1Q9Y679 476 aa1.86□□□□□ -2.11
SCARNA4-201ENST00000629045 POMT1Q9Y6A1 747 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms