RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 SSTR2P30874 369 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 ELK3P41970 407 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 HNRNPFP52597 415 aaKnown RBP12.6□□□□□ -0.39
TCF4-262ENST00000628078 REEP5Q00765 189 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 FBXO48Q5FWF7 155 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 NXPE4Q6UWF7 544 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 QSOX2Q6ZRP7 698 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 CLNKQ7Z7G1 428 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 ANKMY2Q8IV38 441 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 MARVELD2Q8N4S9 558 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 TMEM52Q8NDY8 209 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 SMIM10Q96HG1 83 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 EGFL8Q99944 293 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 AIF1LQ9BQI0 150 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 SARGQ9BW04 601 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 SLC6A16Q9GZN6 736 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 DDX47Q9H0S4 455 aaKnown RBP12.6□□□□□ -0.39
TCF4-262ENST00000628078 COQ3Q9NZJ6 369 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 ZNF223Q9UK11 482 aaPredicted RBP12.6□□□□□ -0.39
TCF4-262ENST00000628078 JRKLQ9Y4A0 524 aa12.6□□□□□ -0.39
TCF4-262ENST00000628078 F8P00451 2351 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 IGKV3D-11A0A0A0MRZ8 115 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 FAM166BA8MTA8 275 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 KLRC4-KLRK1H3BQV0 150 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 ITGA10O75578 1167 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 TFEBP19484 476 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 AHRP35869 848 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 CLCN2P51788 898 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 AP1S2P56377 157 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 CMPK2Q5EBM0 449 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 SBSNQ6UWP8 590 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 IL20RBQ6UXL0 311 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 CCDC71Q8IV32 467 aaPredicted RBP12.59□□□□□ -0.39
TCF4-262ENST00000628078 LGI4Q8N135 537 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 CYP4Z2PQ8N1L4 340 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 SLC35F6Q8N357 371 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 APCDD1LQ8NCL9 501 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 B3GNT7Q8NFL0 401 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 FAM57AQ8TBR7 257 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 CREB3L4Q8TEY5 395 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 GRK7Q8WTQ7 553 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 ATL1Q8WXF7 558 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 NCLNQ969V3 563 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 OSBPL9Q96SU4 736 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 KLF13Q9Y2Y9 288 aaPredicted RBP12.59□□□□□ -0.39
TCF4-262ENST00000628078 TACC2O95359 2948 aa12.59□□□□□ -0.39
TCF4-262ENST00000628078 URADA6NGE7 173 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 NCF1BA6NI72 391 aaPredicted RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 NCF1CA8MVU1 366 aaPredicted RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 PIAS1O75925 651 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 WDR47O94967 919 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 TTC4O95801 387 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 NCF1P14598 390 aaPredicted RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 HNRNPH1P31943 449 aaKnown RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 TRHRP34981 398 aaPredicted RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 HCFC1P51610 2035 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 SKP1P63208 163 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 SLC13A2Q13183 592 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 XKR6Q5GH73 641 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 ADNP2Q6IQ32 1131 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 FAM45BPQ6NSW5 357 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 CDH24Q86UP0 819 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 CNTN4Q8IWV2 1026 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.58□□□□□ -0.4
TCF4-262ENST00000628078 SPATA6LQ8N4H0 392 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 TRPV3Q8NET8 790 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 OR5M9Q8NGP3 310 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 GABPB2Q8TAK5 448 aaPredicted RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 FAM45AQ8TCE6 357 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 ESAMQ96AP7 390 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 FAR2Q96K12 515 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 NAP1L3Q99457 506 aaPredicted RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 WDR83Q9BRX9 315 aaKnown RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 ENKD1Q9H0I2 346 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 TRIM45Q9H8W5 580 aaPredicted RBP12.58□□□□□ -0.4
TCF4-262ENST00000628078 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 PRTFDC1Q9NRG1 225 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 DEPPQ9NTK1 212 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 TNFRSF10DQ9UBN6 386 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 ERVK-11Q9UQG0 969 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 RNF6Q9Y252 685 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 PSAT1Q9Y617 370 aa12.58□□□□□ -0.4
TCF4-262ENST00000628078 MED13LQ71F56 2210 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 ADGRG4Q8IZF6 3080 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 A0A0G2JMM0 328 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 A0A1W2PPB8 328 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 A0A1W2PRS3 328 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 KIR3DP1A8MWS1 328 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 NPIPA2E9PIF3 369 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 NPIPA3F8WFD2 350 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 WWP2O00308 870 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 ERI3O43414 337 aaKnown RBP12.57□□□□□ -0.4
TCF4-262ENST00000628078 DIAPH2O60879 1101 aa12.57□□□□□ -0.4
TCF4-262ENST00000628078 H2AFYO75367 372 aaKnown RBP12.57□□□□□ -0.4
TCF4-262ENST00000628078 OR2J2O76002 312 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms