RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 NBEAQ8NFP9 2946 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 A0A0G2JN53 185 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 H3BQF6 201 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 BMP10O95393 424 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 ESRRBO95718 433 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 XCR1P46094 333 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 NEK2P51955 445 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 OLR1P78380 273 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 DEPDC1Q5TB30 811 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 SHISA5Q8N114 240 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 CDYL2Q8N8U2 506 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 TLCD1Q96CP7 247 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 CRB3Q9BUF7 120 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 GATA5Q9BWX5 397 aaPredicted RBP19.19■□□□□ 0.66
PTCD3-220ENST00000627371 SLC29A3Q9BZD2 475 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 OR51B5Q9H339 312 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 SEMA3GQ9NS98 782 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 SNX6Q9UNH7 406 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 MED13Q9UHV7 2174 aa19.19■□□□□ 0.66
PTCD3-220ENST00000627371 ATMQ13315 3056 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 UBFD1O14562 309 aaKnown RBP19.18■□□□□ 0.66
PTCD3-220ENST00000627371 CHST10O43529 356 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 SH3BGRLO75368 114 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 ZWINTO95229 277 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 IGHEP01854 428 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 ITGB2P05107 769 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 ENO1P06733 434 aaKnown RBP19.18■□□□□ 0.66
PTCD3-220ENST00000627371 IL10P22301 178 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 MMP11P24347 488 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 PTX3P26022 381 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-220ENST00000627371 OTX2P32243 289 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 ARFIP1P53367 373 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 MTTPP55157 894 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 CUL3Q13618 768 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 UBE3DQ7Z6J8 389 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 LAPTM4BQ86VI4 370 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 PRSS58Q8IYP2 241 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 NACC2Q96BF6 587 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 MTFMTQ96DP5 389 aaKnown RBP19.18■□□□□ 0.66
PTCD3-220ENST00000627371 PEX11GQ96HA9 241 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 IP6K3Q96PC2 410 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 OR1F2PQ96R84 312 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 SERINC2Q96SA4 455 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 CENPKQ9BS16 269 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 TBCDQ9BTW9 1192 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 NPLQ9BXD5 320 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-220ENST00000627371 ROGDIQ9GZN7 287 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 VIPAS39Q9H9C1 493 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 COPS7BQ9H9Q2 264 aaPredicted RBP19.18■□□□□ 0.66
PTCD3-220ENST00000627371 MID1IP1Q9NPA3 183 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 PRDM7Q9NQW5 492 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 C3orf18Q9UK00 162 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 LHX6Q9UPM6 363 aa19.18■□□□□ 0.66
PTCD3-220ENST00000627371 IDSB3KWA1 339 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 B3GALT2O43825 422 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 DNAJB6O75190 326 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 JRKO75564 520 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 SCELO95171 688 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 ETHE1O95571 254 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 BPGMP07738 259 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 TSFMP43897 325 aaKnown RBP19.17■□□□□ 0.66
PTCD3-220ENST00000627371 CCR10P46092 362 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 RAP1GDS1P52306 607 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 RHDQ02161 417 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 DEFB109BQ30KR1 87 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 PPP1R32Q7Z5V6 425 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 MRGPREQ86SM8 312 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 CA13Q8N1Q1 262 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 METTL6Q8TCB7 284 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 SELENOMQ8WWX9 145 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 SREK1Q8WXA9 508 aaKnown RBP19.17■□□□□ 0.66
PTCD3-220ENST00000627371 CNDP1Q96KN2 507 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 SERPINI1Q99574 410 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 TRMOQ9BU70 441 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 KCNK9Q9NPC2 374 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 MAN2B2Q9Y2E5 1009 aa19.17■□□□□ 0.66
PTCD3-220ENST00000627371 SAP18O00422 153 aaKnown RBP19.16■□□□□ 0.66
PTCD3-220ENST00000627371 PLPP1O14494 284 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 NPHS1O60500 1241 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 SEMA3DO95025 777 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 PDYNP01213 254 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 KRT6AP02538 564 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 KRT6BP04259 564 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 FHP07954 510 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 CYC1P08574 325 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 DHRS4L1P0CG22 281 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 RNH1P13489 461 aaKnown RBP19.16■□□□□ 0.66
PTCD3-220ENST00000627371 CERS1P27544 350 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 HMOX2P30519 316 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 SSR2P43308 183 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 SERPINB4P48594 390 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 KRT6CP48668 564 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 EMP2P54851 167 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 MAGOHP61326 146 aaKnown RBP19.16■□□□□ 0.66
PTCD3-220ENST00000627371 MPP2Q14168 576 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 TCHHL1Q5QJ38 904 aaPredicted RBP19.16■□□□□ 0.66
PTCD3-220ENST00000627371 AGBL2Q5U5Z8 902 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 FAM219BQ5XKK7 198 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 ZNF793Q6ZN11 406 aa19.16■□□□□ 0.66
PTCD3-220ENST00000627371 RGMAQ96B86 450 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms