RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 SPRYD7Q5W111 196 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 VRK3Q8IV63 474 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 ZFP41Q8N8Y5 198 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 SMAD5Q99717 465 aaKnown RBP13.33□□□□□ -0.28
UBE3A-209ENST00000625778 ACAT2Q9BWD1 397 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.33□□□□□ -0.28
UBE3A-209ENST00000625778 FKBP14Q9NWM8 211 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 MBD1Q9UIS9 605 aaPredicted RBP13.33□□□□□ -0.28
UBE3A-209ENST00000625778 GRIP1Q9Y3R0 1128 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 PCDHB11Q9Y5F2 797 aa13.33□□□□□ -0.28
UBE3A-209ENST00000625778 A0A0X1KG70 313 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 GADD45GO95257 159 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 ZNF865P0CJ78 1059 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 HMGCLP35914 325 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 ATP5C1P36542 298 aaKnown RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 CDH4P55283 916 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 WNT3P56703 355 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 RGNQ15493 299 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 IFI44LQ53G44 452 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 PLET1Q6UQ28 207 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 ZNF557Q8N988 423 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 WBP2Q969T9 261 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 TESCQ96BS2 214 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 A3GALT2U3KPV4 340 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 V9GYH0 126 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 A0A0G2JMP0 313 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 A0A0U1RQF3 1178 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 MRPS14O60783 128 aaKnown RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 KLKB1P03952 638 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 BPIP17213 487 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 RPL17P18621 184 aaKnown RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 INPP1P49441 399 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 IER5LQ5T953 404 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 CERS6Q6ZMG9 384 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 TSEN54Q7Z6J9 526 aaKnown RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 HMGN2P46Q86SG4 172 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 ATCAYQ86WG3 371 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 IQCF1Q8N6M8 205 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 SYT14Q8NB59 555 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 DNAJB8Q8NHS0 232 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 CRELD1Q96HD1 420 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 SLC29A3Q9BZD2 475 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 HHATLQ9HCP6 504 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 GABRR3A8MPY1 467 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 RFXAPO00287 272 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 SRCP12931 536 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 ANXA8P13928 327 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 TNNI3P19429 210 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 CHI3L1P36222 383 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 ABRQ12979 859 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 MICAQ29983 383 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 GPRC6AQ5T6X5 926 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 AMIGO1Q86WK6 493 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 MEX3DQ86XN8 651 aaKnown RBP13.32□□□□□ -0.28
UBE3A-209ENST00000625778 SIMC1Q8NDZ2 872 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 DEDD2Q8WXF8 326 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 C1GALT1C1Q96EU7 318 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 LINC00597Q9H2U6 94 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 RETREG1Q9H6L5 497 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 NLKQ9UBE8 527 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 KLK4Q9Y5K2 254 aa13.32□□□□□ -0.28
UBE3A-209ENST00000625778 DOCK3Q8IZD9 2030 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 SMAD6O43541 496 aaKnown RBP13.31□□□□□ -0.28
UBE3A-209ENST00000625778 TBL1XO60907 577 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 GASTP01350 101 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 F11P03951 625 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 SDHBP21912 280 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 CHMP24386 653 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 ACRV1P26436 265 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 CCR7P32248 378 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 CHRNEQ04844 493 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 SRSF11Q05519 484 aaKnown RBP13.31□□□□□ -0.28
UBE3A-209ENST00000625778 SPHARQ15513 63 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
UBE3A-209ENST00000625778 PLAG1Q6DJT9 500 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 TYW3Q6IPR3 259 aaKnown RBP13.31□□□□□ -0.28
UBE3A-209ENST00000625778 SERPINA13PQ6UXR4 307 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 DPY19L3Q6ZPD9 716 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 SZRD1Q7Z422 152 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 ATP6V1C2Q8NEY4 427 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 VPS37AQ8NEZ2 397 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 GRPEL2Q8TAA5 225 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 CTPS2Q9NRF8 586 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 VPS29Q9UBQ0 182 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 SSR3Q9UNL2 185 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 MN1Q10571 1320 aaPredicted RBP13.31□□□□□ -0.28
UBE3A-209ENST00000625778 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 B4DXG7 233 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 MYL12BO14950 172 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 PSIP1O75475 530 aaKnown RBP13.31□□□□□ -0.28
UBE3A-209ENST00000625778 CLDN11O75508 207 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 B3GALNT1O75752 331 aa13.31□□□□□ -0.28
UBE3A-209ENST00000625778 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
UBE3A-209ENST00000625778 GPC1P35052 558 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms