RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 CCDC77Q9BR77 488 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 LIN28AQ9H9Z2 209 aaKnown RBP13.67□□□□□ -0.22
PNKP-218ENST00000625299 DLL4Q9NR61 685 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 PNO1Q9NRX1 252 aaKnown RBP13.67□□□□□ -0.22
PNKP-218ENST00000625299 HPF1Q9NWY4 346 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 KLHL42Q9P2K6 505 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 Q9UFV3 132 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 PDE10AQ9Y233 779 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 IGKV3D-11A0A0A0MRZ8 115 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 BCKDKO14874 412 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 RNH1P13489 461 aaKnown RBP13.66□□□□□ -0.22
PNKP-218ENST00000625299 SLC1A2P43004 574 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 KIR2DL3P43628 341 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 ADAM8P78325 824 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 LTBQ06643 244 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 PWP1Q13610 501 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 NIPAL1Q6NVV3 410 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 IL20RBQ6UXL0 311 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 C4orf22Q6V702 233 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 SLC22A16Q86VW1 577 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 ARMC10Q8N2F6 343 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 TBC1D19Q8N5T2 526 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 OR2M7Q8NG81 312 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
PNKP-218ENST00000625299 ASB15Q8WXK1 588 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 SLCO2A1Q92959 643 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 NCLNQ969V3 563 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 PYCR2Q96C36 320 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 VMP1Q96GC9 406 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 ALPK1Q96QP1 1244 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 DESI2Q9BSY9 194 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 HAUS8Q9BT25 410 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 SGPP1Q9BX95 441 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 TTTY12Q9BZ98 90 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 ALKBH4Q9NXW9 302 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 ZFATQ9P243 1243 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 TRMT6Q9UJA5 497 aaKnown RBP13.66□□□□□ -0.22
PNKP-218ENST00000625299 ZNF223Q9UK11 482 aaPredicted RBP13.66□□□□□ -0.22
PNKP-218ENST00000625299 EDARQ9UNE0 448 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 RPH3AQ9Y2J0 694 aaPredicted RBP13.66□□□□□ -0.22
PNKP-218ENST00000625299 FAM215AQ9Y5M1 114 aa13.66□□□□□ -0.22
PNKP-218ENST00000625299 EML6Q6ZMW3 1958 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 HRNRQ86YZ3 2850 aaPredicted RBP13.65□□□□□ -0.22
PNKP-218ENST00000625299 TRBC2A0A5B9 178 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 PABPN1LA6NDY0 278 aaKnown RBP13.65□□□□□ -0.22
PNKP-218ENST00000625299 PRKNO60260 465 aaPredicted RBP13.65□□□□□ -0.22
PNKP-218ENST00000625299 OR2J2O76002 312 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 C8GP07360 202 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 FOSL1P15407 271 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 NPPBP16860 134 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 TPSB2P20231 275 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 PPP2R1BP30154 601 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 UQCRC1P31930 480 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 ADH7P40394 386 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 VPS41P49754 854 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 TPSAB1Q15661 275 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 CATSPEREQ5SY80 951 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 HECTD2Q5U5R9 776 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 TAOK1Q7L7X3 1001 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 CDC20BQ86Y33 519 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 MYO1HQ8N1T3 1032 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 NT5CQ8TCD5 201 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 EEF1AKMT1Q8WVE0 214 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 SMR3AQ99954 134 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 SPNS1Q9H2V7 528 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 ZDHHC11Q9H8X9 412 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 PARVBQ9HBI1 364 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 RASSF1Q9NS23 344 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 CRIM1Q9NZV1 1036 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 ACAD8Q9UKU7 415 aa13.65□□□□□ -0.22
PNKP-218ENST00000625299 YARS2Q9Y2Z4 477 aaKnown RBP13.65□□□□□ -0.22
PNKP-218ENST00000625299 OR14I1A6ND48 311 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 ZFAND5O76080 213 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 OR6B1O95007 311 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 HIST1H2AGP0C0S8 130 aaPredicted RBP13.64□□□□□ -0.23
PNKP-218ENST00000625299 HIST1H2ADP20671 130 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 MAGEA5P43359 124 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 KCNJ1P48048 391 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 RGS4P49798 205 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 SARNPP82979 210 aaKnown RBP13.64□□□□□ -0.23
PNKP-218ENST00000625299 DHX9Q08211 1270 aaKnown RBP13.64□□□□□ -0.23
PNKP-218ENST00000625299 TRIP13Q15645 432 aaPredicted RBP13.64□□□□□ -0.23
PNKP-218ENST00000625299 CCNG2Q16589 344 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 PHKG1Q16816 387 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 SLC25A35Q3KQZ1 300 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 C1orf185Q5T7R7 199 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 FBXW10Q5XX13 1052 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 RTL6Q6ICC9 239 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 KIAA0408Q6ZU52 694 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 CA13Q8N1Q1 262 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 FAM109AQ8N4B1 249 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 ABHD11Q8NFV4 315 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 SNF8Q96H20 258 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 HIST1H2AHQ96KK5 128 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 TSNARE1Q96NA8 513 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 NDNQ99608 321 aa13.64□□□□□ -0.23
PNKP-218ENST00000625299 HIST1H2AJQ99878 128 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms