RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ESRRGP62508 458 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 RBBP4Q09028 425 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 CEP68Q76N32 757 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 MMP21Q8N119 569 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 NRBF2Q96F24 287 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 C7orf34Q96L11 122 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 PRO3102Q9H379 93 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 TMEM38AQ9H6F2 299 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 PREBQ9HCU5 417 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 IMP3Q9NV31 184 aaKnown RBP18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 PCDHGA8Q9Y5G5 932 aa18.83■□□□□ 0.61
PCDHB11-202ENST00000624887 TBC1D3DA0A087WVF3 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3IA0A087WXS9 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3EA0A087X179 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3KA0A087X1G2 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 LOC100130705A0A1B0GUX0 176 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3FA6NER0 549 aaPredicted RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TMEM229AB2RXF0 380 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3LB9A6J9 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 SLC16A6O15403 523 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 CAPN5O15484 640 aaPredicted RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3HP0C7X1 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 DDCP20711 480 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 FPR1P21462 350 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 CTHP32929 405 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 MAPK12P53778 367 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 ITGA1P56199 1179 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 KCNJ10P78508 379 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 PRDX1Q06830 199 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 CLCA4Q14CN2 919 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 IQCCQ4KMZ1 466 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 RBM48Q5RL73 367 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 GCNT6Q5T4J0 391 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3GQ6DHY5 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3CQ6IPX1 549 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TRIM40Q6P9F5 258 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 CHRDL2Q6WN34 429 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 ADGRF3Q8IZF5 1079 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBC1D3Q8IZP1 549 aaPredicted RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 DRAXINQ8NBI3 349 aaPredicted RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TPD52L3Q96J77 140 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 QRFPRQ96P65 431 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 DOHHQ9BU89 302 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 NPLQ9BXD5 320 aaPredicted RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 RAB11FIP5Q9BXF6 653 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 LTB4R2Q9NPC1 389 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 C1GALT1Q9NS00 363 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 RSL24D1Q9UHA3 163 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 PLEKHM1Q9Y4G2 1056 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 SZT2Q5T011 3432 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 HEATR5BQ9P2D3 2071 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 XIRP2A4UGR9 3374 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 RTCAO00442 366 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TBX19O60806 448 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 DIRAS1O95057 198 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 HOXB2P14652 356 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 COL9A1P20849 921 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 AQP1P29972 269 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 PKLRP30613 574 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 MAT2AP31153 395 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 YAP1P46937 504 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 CDK9P50750 372 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 CSNK1G2P78368 415 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 SLC5A12Q1EHB4 618 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 ZBED5Q49AG3 693 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 GPR141Q7Z602 305 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 OR2A1Q8NGT9 310 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 RNF217Q8TC41 542 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 TM4SF18Q96CE8 201 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 SCARF2Q96GP6 870 aaPredicted RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 BARD1Q99728 777 aaKnown RBP18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 RAD21L1Q9H4I0 556 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 FZD3Q9NPG1 666 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 ACSL6Q9UKU0 697 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 GPSM3Q9Y4H4 160 aa18.82■□□□□ 0.6
PCDHB11-202ENST00000624887 MYO1GB0I1T2 1018 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 CACNB4O00305 520 aaPredicted RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 OR1F1O43749 312 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 KLF8O95600 359 aaPredicted RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 EGFP01133 1207 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 ITGAMP11215 1152 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 IGFBP5P24593 272 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 CHI3L1P36222 383 aaPredicted RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 LTBRP36941 435 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 SELENOWP63302 87 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 HTR4Q13639 388 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 ELOAQ14241 798 aaKnown RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 CYP4Z1Q86W10 505 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 NATD1Q8N6N6 113 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 OR2L8Q8NGY9 312 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 HDAC2Q92769 488 aaKnown RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 XKR8Q9H6D3 395 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 MVB12BQ9H7P6 319 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 LHX9Q9NQ69 397 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 MOSPD1Q9UJG1 213 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 SCML1Q9UN30 329 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 PADI2Q9Y2J8 665 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 MTCH2Q9Y6C9 303 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 PLXND1Q9Y4D7 1925 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms