RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 NUDT7P0C024 238 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 HLA-EP13747 358 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 ENGP17813 658 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 TNFRSF1BP20333 461 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CTNNB1P35222 781 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 PREPP48147 710 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 ABHD18Q0P651 414 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 TIGD6Q17RP2 521 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 ADNP2Q6IQ32 1131 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 FAM122CQ6P4D5 195 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 NLGN4XQ8N0W4 816 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 TCAIMQ8N3R3 496 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 FBXL6Q8N531 539 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 PARP16Q8N5Y8 322 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 POF1BQ8WVV4 589 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CHCHD6Q9BRQ6 235 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 WRAP53Q9BUR4 548 aaKnown RBP12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 TMEM184CQ9NVA4 438 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 C14orf119Q9NWQ9 140 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 TAS2R16Q9NYV7 291 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 SAMD4AQ9UPU9 718 aaKnown RBP12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 A0A0X1KG70 313 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 WASH3PC4AMC7 463 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 MOSPD3O75425 235 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CCNDBP1O95273 360 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 LINC00271P0C7V0 271 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 ICAM2P13598 275 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 FPR1P21462 350 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CFL1P23528 166 aaKnown RBP12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 PSMA3P25788 255 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 VIPR2P41587 438 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 IDH2P48735 452 aaKnown RBP12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CXCR4P61073 352 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CAMK2GQ13555 558 aaPredicted RBP12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 PTCHD3Q3KNS1 767 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 TRIM46Q7Z4K8 759 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 KCTD20Q7Z5Y7 419 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CACTIN-AS1Q8N1I8 211 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 METTL4Q8N3J2 472 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 SIMC1Q8NDZ2 872 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 OR52J3Q8NH60 311 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 GRPEL2Q8TAA5 225 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 MAL2Q969L2 176 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 METTL2AQ96IZ6 378 aaKnown RBP12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 P2RY13Q9BPV8 354 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 CDADC1Q9BWV3 514 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 SNX8Q9Y5X2 465 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 PLXNA4Q9HCM2 1894 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 A0A0G2JMP0 313 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 CLIC1O00299 241 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 TLL1O43897 1013 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 PRAMEF4O60810 478 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 STK16O75716 305 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 SDC1P18827 310 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 B2MP61769 119 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 SNTA1Q13424 505 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 GRIN2CQ14957 1233 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 LRIF1Q5T3J3 769 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 PRAMEF9Q5VWM5 478 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 USP45Q70EL2 814 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 CLECL1Q8IZS7 167 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 IRF7Q92985 503 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 PANX1Q96RD7 426 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 RIOK2Q9BVS4 552 aaKnown RBP12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 REEP1Q9H902 201 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 RAD18Q9NS91 495 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 GPR83Q9NYM4 423 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 OARD1Q9Y530 152 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 PCDHGA6Q9Y5G7 932 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 NINQ8N4C6 2090 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 CLDN24A6NM45 220 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 WNT9AO14904 365 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 WDR47O94967 919 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 EPORP19235 508 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 KDELR2P33947 212 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 CTSKP43235 329 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 DGKEP52429 567 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 CLDN8P56748 225 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 DUSP7Q16829 419 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 OR6F1Q8NGZ6 308 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 BADQ92934 168 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 PDLIM5Q96HC4 596 aaKnown RBP12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 MMP27Q9H306 513 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 SNX6Q9UNH7 406 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 SPEGQ15772 3267 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 F5P12259 2224 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 KCNK5O95279 499 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 NTRK1P04629 796 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 CTSLP07711 333 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 STSP08842 583 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 NSG1P42857 185 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 RECQLP46063 649 aaPredicted RBP12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 SPINT3P49223 89 aa12.87□□□□□ -0.35
PCDHB17P-202ENST00000623466 PROX2Q3B8N5 592 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms