RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 UBL4AP11441 157 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 IFI30P13284 250 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 PRKACBP22694 351 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 ACRV1P26436 265 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 POU1F1P28069 291 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 SSTR4P31391 388 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 CPT1AP50416 773 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 DGKEP52429 567 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 TAF1CQ15572 869 aaPredicted RBP13.54□□□□□ -0.24
LDB3-209ENST00000623056 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
LDB3-209ENST00000623056 CCL14Q16627 93 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 CYP27C1Q4G0S4 372 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 DGKKQ5KSL6 1271 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 KLHL17Q6TDP4 642 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 ZNF767PQ75MW2 155 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 ADGRG2Q8IZP9 1017 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 NATD1Q8N6N6 113 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 ZNF557Q8N988 423 aaPredicted RBP13.54□□□□□ -0.24
LDB3-209ENST00000623056 MSLNLQ96KJ4 702 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 VPS35Q96QK1 796 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 IL4I1Q96RQ9 567 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 TCF25Q9BQ70 676 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 MCOLN1Q9GZU1 580 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 SLC25A19Q9HC21 320 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 ACER3Q9NUN7 267 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 SSR3Q9UNL2 185 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 CORO2BQ9UQ03 480 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 ALG5Q9Y673 324 aa13.54□□□□□ -0.24
LDB3-209ENST00000623056 ACSL4O60488 711 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 NOS1APO75052 506 aaPredicted RBP13.53□□□□□ -0.24
LDB3-209ENST00000623056 ZNF623O75123 536 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 TRBC1P01850 177 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 CYP2A6P11509 494 aaPredicted RBP13.53□□□□□ -0.24
LDB3-209ENST00000623056 ATF6P18850 670 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 CRISP1P54107 249 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 CASP9P55211 416 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 HNRNPA0Q13151 305 aaKnown RBP13.53□□□□□ -0.24
LDB3-209ENST00000623056 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.53□□□□□ -0.24
LDB3-209ENST00000623056 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 GLCCI1Q86VQ1 547 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 AQP11Q8NBQ7 271 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 KATNAL1Q9BW62 490 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 DIABLOQ9NR28 239 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 SH3BP4Q9P0V3 963 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 PLEKHB1Q9UF11 243 aaPredicted RBP13.53□□□□□ -0.24
LDB3-209ENST00000623056 KCNN3Q9UGI6 736 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 TEKT2Q9UIF3 430 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 BRCA2P51587 3418 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 B4GALT3O60512 393 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 TPST2O60704 377 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 OR2B3O76000 313 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 CD160O95971 181 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 HBQ1P09105 142 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 C1SP09871 688 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 CLEC2LP0C7M8 214 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 SRCP12931 536 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 ITGALP20701 1170 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 PPIBP23284 216 aaKnown RBP13.53□□□□□ -0.24
LDB3-209ENST00000623056 UQCRC1P31930 480 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 LIMS1P48059 325 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 ARF5P84085 180 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 ESCO2Q56NI9 601 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 LAMTOR1Q6IAA8 161 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 FRMPD2BQ6IN97 320 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 PLET1Q6UQ28 207 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 CREB3L2Q70SY1 520 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 FAM20CQ8IXL6 584 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 LAS2Q8IYD9 372 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 FAM46DQ8NEK8 389 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 FZD3Q9NPG1 666 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 IL26Q9NPH9 171 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 C11orf16Q9NQ32 467 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 ENOPH1Q9UHY7 261 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 BTNL2Q9UIR0 455 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 NDRG2Q9UN36 371 aaKnown RBP13.53□□□□□ -0.24
LDB3-209ENST00000623056 SPEF1Q9Y4P9 236 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 DOCK3Q8IZD9 2030 aa13.53□□□□□ -0.24
LDB3-209ENST00000623056 B8ZZF3 427 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 PLD2O14939 933 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 SCAMP2O15127 329 aaKnown RBP13.52□□□□□ -0.24
LDB3-209ENST00000623056 SHOXO15266 292 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 FZD6O60353 706 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 TRIM3O75382 744 aaPredicted RBP13.52□□□□□ -0.24
LDB3-209ENST00000623056 PDE9AO76083 593 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 OAZ2O95190 189 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 LGI1O95970 557 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 AOAHP28039 575 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 CD52P31358 61 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 CRATP43155 626 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 SGSHP51688 502 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 GANABQ14697 944 aaKnown RBP13.52□□□□□ -0.24
LDB3-209ENST00000623056 ARHGEF6Q15052 776 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 COX20Q5RI15 118 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 LCN1P1Q5VSP4 162 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 LIPKQ5VXJ0 399 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 ANGPTL8Q6UXH0 198 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 PIH1D2Q8WWB5 315 aa13.52□□□□□ -0.24
LDB3-209ENST00000623056 KLHL6Q8WZ60 621 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms