RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	CRELD1	Q96HD1	420 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	OPALIN	Q96PE5	141 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	MTERF1	Q99551	399 aa	Known RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	HHATL	Q9HCP6	504 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	C11orf16	Q9NQ32	467 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	SH3BP4	Q9P0V3	963 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	RHCG	Q9UBD6	479 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	FZD4	Q9ULV1	537 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	MYO16	Q9Y6X6	1858 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	CIB4	A0PJX0	185 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045		J3KTA2	159 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	PLD2	O14939	933 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	LRRTM2	O43300	516 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF250	P15622	560 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	MLLT3	P42568	568 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	CDH18	Q13634	790 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	ADGRF1	Q5T601	910 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	LIPK	Q5VXJ0	399 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	CBLL1	Q75N03	491 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	GPR65	Q8IYL9	337 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	OR8H3	Q8N146	312 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	SH3KBP1	Q96B97	665 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	MTERF3	Q96E29	417 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	GABARAPL3	Q9BY60	117 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF556	Q9HAH1	456 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	C3orf14	Q9HBI5	128 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	HCN4	Q9Y3Q4	1203 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	PLA2G10	O15496	165 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	TRAPPC2	P0DI81	140 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	TRAPPC2B	P0DI82	140 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	IRF8	Q02556	426 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	SRSF11	Q05519	484 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	GANAB	Q14697	944 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	FRG2	Q64ET8	278 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	PAQR6	Q6TCH4	344 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	ANKS3	Q6ZW76	656 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	VPS37A	Q8NEZ2	397 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	TESC	Q96BS2	214 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	FRG2B	Q96QU4	278 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	GALNT9	Q9HCQ5	603 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	KCTD5	Q9NXV2	234 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	DNAJC27	Q9NZQ0	273 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	PCDHGA2	Q9Y5H1	932 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	ACRV1	P26436	265 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	APEX1	P27695	318 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	LIMK1	P53667	647 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	ACSM2A	Q08AH3	577 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	CHIT1	Q13231	466 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	GPR17	Q13304	367 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	IRF5	Q13568	498 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	SLC35F1	Q5T1Q4	408 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	ACSM2B	Q68CK6	577 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	IDO2	Q6ZQW0	420 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	RDH10	Q8IZV5	341 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	CSGALNACT1	Q8TDX6	532 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	C7orf34	Q96L11	122 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	COPS8	Q99627	209 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	RAD9A	Q99638	391 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	EVA1B	Q9NVM1	165 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	FKBP14	Q9NWM8	211 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	SNTN	A6NMZ2	147 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	COCH	O43405	550 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	CRAT	P43155	626 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	SLC9A3	P48764	834 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	DSC1	Q08554	894 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	MRPL28	Q13084	256 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	LARS2	Q15031	903 aa	Known RBP	13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	DGKK	Q5KSL6	1271 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	SLC43A3	Q8NBI5	491 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	ATP6V1C2	Q8NEY4	427 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	REPS1	Q96D71	796 aa		13.81	□□□□□ -0.2
SYNRG-231	ENST00000622045	FAM227A	F5H4B4	570 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	BTN3A3	O00478	584 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	TRBC1	P01850	177 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	BPI	P17213	487 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	POLR2C	P19387	275 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	PSMA3	P25788	255 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	ASAH1	Q13510	395 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	FLYWCH1	Q4VC44	716 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	LAMTOR1	Q6IAA8	161 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	C2orf69	Q8N8R5	385 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	PHF21A	Q96BD5	680 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	MSANTD3	Q96H12	275 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	ACAT2	Q9BWD1	397 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	MIXL1	Q9H2W2	232 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	RGS17	Q9UGC6	210 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	TSPAN4	O14817	238 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	OR7A10	O76100	309 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	CCNB2	O95067	398 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	LAMP1	P11279	417 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	KCNJ10	P78508	379 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	C22orf42	Q6IC83	251 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	PLCZ1	Q86YW0	608 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	BBS7	Q8IWZ6	715 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	FBXL6	Q8N531	539 aa		13.8	□□□□□ -0.2

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