RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 H3BN98 237 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 ENTPD6O75354 484 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 IGHA2P01877 340 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 C8GP07360 202 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 CSNK1DP48730 415 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 DUSP7Q16829 419 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 SLC5A12Q1EHB4 618 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 TCTN1Q2MV58 587 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 LYPLAL1Q5VWZ2 237 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 TUBA3EQ6PEY2 450 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 AGTRAPQ6RW13 159 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 TPRG1Q6ZUI0 275 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 WDR20Q8TBZ3 569 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 ADAMTS19Q8TE59 1207 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 ABCB8Q9NUT2 735 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 TBC1D14Q9P2M4 693 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 POFUT2Q9Y2G5 429 aa15.12■□□□□ 0.01
NPHP4-211ENST00000622020 CHMP24386 653 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 HTR3AP46098 478 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 CSNK2BP67870 215 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 SLAMF1Q13291 335 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 GGTA1PQ4G0N0 100 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 CCSAPQ6IQ19 270 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-211ENST00000622020 DPY19L3Q6ZPD9 716 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 TRIM48Q8IWZ4 208 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 OR7G3Q8NG95 312 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 OR6F1Q8NGZ6 308 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 SCRN2Q96FV2 425 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 HHIPQ96QV1 700 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 BARHL1Q9BZE3 327 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 TAS2R9Q9NYW1 312 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 EXO1Q9UQ84 846 aaKnown RBP15.11■□□□□ 0.01
NPHP4-211ENST00000622020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-211ENST00000622020 CBSLP0DN79 551 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 ANXA8P13928 327 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 GABRB1P18505 474 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 PDHA2P29803 388 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 CBSP35520 551 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 HNMTP50135 292 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 CDC42P60953 191 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 FAM26DQ5JW98 314 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 SPOUT1Q5T280 376 aaKnown RBP15.11■□□□□ 0.01
NPHP4-211ENST00000622020 MEX3DQ86XN8 651 aaKnown RBP15.11■□□□□ 0.01
NPHP4-211ENST00000622020 NECTIN4Q96NY8 510 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 CHST8Q9H2A9 424 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 MTG2Q9H4K7 406 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 ANKHQ9HCJ1 492 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 ACER3Q9NUN7 267 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 YIPF1Q9Y548 306 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 CCRL2O00421 344 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 C1SP09871 688 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 ETV3P41162 512 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 ZFP69Q49AA0 526 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 Q6ZVU0 165 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 USP45Q70EL2 814 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 GPR155Q7Z3F1 870 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 PGBD3Q8N328 593 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 NEIL2Q969S2 332 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 SUV39H2Q9H5I1 410 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 ZNF334Q9HCZ1 680 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-211ENST00000622020 PAQR5Q9NXK6 330 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-211ENST00000622020 MKLN1Q9UL63 735 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 KLHL20Q9Y2M5 609 aa15.11■□□□□ 0.01
NPHP4-211ENST00000622020 SH3BP5O60239 455 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 CCNB2O95067 398 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 TBRG1Q3YBR2 411 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 SYTL3Q4VX76 610 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 LIPKQ5VXJ0 399 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 TNFAIP8L2Q6P589 184 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-211ENST00000622020 RNF165Q6ZSG1 346 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 TMEM150AQ86TG1 271 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 CCDC190Q86UF4 302 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 ATCAYQ86WG3 371 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 DEPDC4Q8N2C3 294 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 WDR48Q8TAF3 677 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 UBASH3BQ8TF42 649 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 SCLYQ96I15 445 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 FYTTD1Q96QD9 318 aaKnown RBP15.1■□□□□ 0.01
NPHP4-211ENST00000622020 OR2A14Q96R47 310 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 CTPS2Q9NRF8 586 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 PLCXD1Q9NUJ7 323 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 SH2B3Q9UQQ2 575 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 TRBC2A0A5B9 178 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 TSPAN6O43657 245 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 CLEC2LP0C7M8 214 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 HOXB6P17509 224 aaKnown RBP15.1■□□□□ 0.01
NPHP4-211ENST00000622020 MVDP53602 400 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 CDK6Q00534 326 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 C2orf80Q0P641 193 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 COL9A2Q14055 689 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-211ENST00000622020 GCNT6Q5T4J0 391 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 ZNF517Q6ZMY9 492 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-211ENST00000622020 OLIG3Q7RTU3 272 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 IQCF1Q8N6M8 205 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 DEPDC7Q96QD5 511 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 MCCC1Q96RQ3 725 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-211ENST00000622020 VN1R3Q9BXE9 311 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 NXF2Q9GZY0 626 aaKnown RBP15.1■□□□□ 0.01
NPHP4-211ENST00000622020 NMNAT1Q9HAN9 279 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms